Salvelinus namaycush (lake trout): 120056935
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Entry
120056935 CDS
T07522
Symbol
dcps
Name
(RefSeq) m7GpppX diphosphatase isoform X1
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120056935 (dcps)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120056935 (dcps)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
120056935 (dcps)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
120056935 (dcps)
3'-5' decay
Other 3'-5' decay factors
120056935 (dcps)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF2145
Motif
Other DBs
NCBI-GeneID:
120056935
NCBI-ProteinID:
XP_038861159
UniProt:
A0A8U1EJU7
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Position
Sna12:14616087..14633436
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AA seq
330 aa
AA seq
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MAETGKREVDFADRNETDAAKAKRLKNDPNSDQDNHNESASANPLFGFKTTTVLRDSARE
KNMFIHGKLNDQDAVIILEKTPIREDTLLEIFNGSRMKLDMRNDIYSTYQLQPPAHLNEM
KTTVVCPATEKHVKKYLRQETYLVQETGEDYRSITLPYIQSQSFSVQWVYNILEKKAEAE
RIVYEDPDQDVGFVLLPDFKWDQKQLDDLHLIAIVHQRDIKSLRDLTALHLPLLSNIRKR
GEESILKRYGVAASKLKVYLHYQPSYYHLHIHFNALSYEAPGCGVEHAHLLSDVIQNLQA
DSQYYHSRSLSFPLRADQGLLSKFKDAGKL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactggtaaacgtgaagttgattttgcggacagaaatgaaactgatgctgct
aaggccaaacgactaaagaatgacccgaatagtgaccaagataatcacaatgaatcagca
tctgcaaatcctttgttcggatttaaaacaacaacggttctgcgggactctgcacgggag
aaaaatatgttcatacacggaaagttgaacgaccaggatgcggtcatcattttggagaag
acccctatcagggaagacaccctgttggagattttcaatggctccagaatgaagttggac
atgaggaatgatatctacagcacgtatcaactccaaccccctgctcatttgaatgagatg
aagaccacagtggtgtgtccggccacagagaagcatgtgaagaaatacctgcgccaggag
acctacttggtgcaggagactggggaggactaccgctctatcaccctaccttacattcag
agtcagagcttcagtgtacagtgggtgtacaacatcttggagaagaaagcggaggcagag
cgcatcgtttatgaggacccagaccaggacgtcggctttgtcctgctcccagacttcaag
tgggaccaaaagcagttggatgacttgcatttgattgccatcgttcatcaaagggacatc
aaaagtttacgagacctgacagcgctgcatctgccattgctgtctaacatccgcaagagg
ggagaggagagcattctgaagcggtacggtgtggcagccagtaagctgaaggtgtacctc
cactaccagccgtcctactaccacctccacatccacttcaacgccctgagctacgaggcc
ccgggctgcggggtggagcatgcccacctgctttcggacgtcatccagaacctccaggca
gactcccagtactaccacagtcgctccctctcctttcccttgcgggctgaccaaggcctg
ctcagcaagttcaaggatgccggcaagctgtag
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