Salvelinus namaycush (lake trout): 120056971
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Entry
120056971 CDS
T07522
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056971
04121 Ubiquitin system [BR:
snh04121
]
120056971
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120056971
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Atypical E3
120056971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120056971
NCBI-ProteinID:
XP_038861227
UniProt:
A0A8U1BXR1
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All DBs
Position
Sna12:17493137..17496171
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AA seq
593 aa
AA seq
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MSSASQASSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKSS
HGVLDGRSPGPQQGKPSSGGPMEGGRQHAERLDRVRGEYGVSPRLPNGLHRAEDVSMSEG
SRQSPNTRRAMAGAIPALHGTIPHALIAQGLVGPPHGLLAPVLGTRAGGQQMAASSGPIM
GDVSRRQVVSAMSLGAGASALVGLEAGWRNGEVMAELAESARSRAEGWPNRPKVVREVLV
TLCGCAPFSVRFRKDHNLVGRILAFEAGAGPEFELKVFVEYPSGSGIVFSGITELVRQMF
RDSNKDAGKAVNSGLRYVEYERRQGAGDWRALTELLSDGVRSFKEPPMPDVLPQLYADGG
MPMAPAARSAPPKGAARRRKASPGSENGDSEGRPMGDHLARDPWPRGAYPGMEPLGSGMP
NPQDGPPRSHSQPSPISALMGVADSLSSNQMSRDGPGMSSAHSSASGRPTSGSPSSASAA
VSQAVMGQGGPSTTSVGESGSGTPSALLCCTLCRERLEDTHFVQCPSVPHHKFCFPCTRG
SIRSQGNGGEVYCPSGERCPLAGSTVPWAFMQGEISTILAGDGDVMVKKENDP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgcctcacaggcatcatctaggcggcaatggtgctatctctgcgatctgccc
aagatgccctgggccatgctctgggaattcagcgaagctgtttgccggggatgtgtgaac
tacgacggggcagacagaatcgagcttctaattgagacggccaggcagttgaagagcagc
cacggtgttttggacggaaggtccccaggccctcagcaaggcaaacccagctcaggtggg
ccaatggaaggagggaggcagcacgcagagcgtttagacagggttaggggagagtatgga
gtttccccccgccttcccaatggtctgcacagagctgaggatgtgagtatgtcagaaggg
agcaggcagagccccaacaccagacgggctatggctggggccatacctgctctacatggg
accatacctcatgctttgatagcccaggggttagtggggccccctcacggcttgttggcc
cccgttctaggcaccagagctgggggccaacagatggctgcctcctctggccctataatg
ggtgatgttagtaggcgtcaggtagtgtcagctatgtcactgggagctggtgcctctgct
ctggtgggtctggaagcaggctggaggaatggggaggtcatggctgagctagcggagagc
gccaggagccgggcagagggctggcccaaccgccccaaagtggtacgagaagtcctggtg
accctctgtggctgtgcccccttcagcgtgcgcttcaggaaagaccacaacttggtgggg
cgcatcctcgctttcgaagccggggccgggcccgagtttgagctgaaggtgtttgtggag
taccccagcggctctggaatagtgttctctggcatcacggagctggtcaggcagatgttc
cgtgactctaacaaagacgcaggcaaagcagtgaactctgggctgcgctatgtggaatac
gagaggcggcagggcgctggggactggcgtgcactcactgagctcctgagcgatggcgtg
cgttcatttaaggagccaccgatgcccgatgttcttccacagttgtacgcagatggcggc
atgccaatggcgcctgccgctcgctctgcacctccaaagggtgctgcacggcgacgcaaa
gcatcccctggctcagaaaacggagatagtgaaggaaggcccatgggggatcacctagcc
agggatccctggcctcgaggtgcctatccaggcatggagcccctgggctcaggcatgccc
aacccccaggacggcccgccccgctcccacagccagccctcacccatctcagcgctcatg
ggagtggccgacagcctgagctccaaccagatgtcccgagatggccccggcatgtcctcg
gcccactcctccgcatctggccgcccaaccagtggcagtccctcctcagcctctgccgca
gtctcccaggcagttatgggccaaggggggccaagcaccaccagcgtcggggagtctgga
agcggcaccccaagcgccctgctctgctgcaccctttgccgagagcgtctggaggacact
cattttgtccagtgtccatctgtcccgcaccacaaattctgcttcccatgcacgcgtggc
tccatccgcagccagggcaacggaggagaggtgtactgccccagcggcgagcgctgccct
ctggctggatccaccgtgccctgggccttcatgcagggagagatctccaccatccttgcc
ggagacggagacgtgatggtaaagaaggagaacgacccctga
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