Salvelinus namaycush (lake trout): 120056984
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Entry
120056984 CDS
T07522
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120056984 (ncapd3)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
120056984 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
HEAT_2
Cnd3
Adaptin_N
TPR_CAND1
VPS15-like_hel
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
120056984
NCBI-ProteinID:
XP_038861241
UniProt:
A0A8U1EUX5
LinkDB
All DBs
Position
Sna12:19664798..19699782
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AA seq
1418 aa
AA seq
DB search
MELIRALDFLKLKDVSGGWVDAVWDFEFTETEPLDAAIVIKNGSKEFKTLYSHLLPYMTD
TEVSTLGTDGTSQSVWTVFGDNGVSVKSLVAVLSYFVLGGKSKTASVQQRISALQASSLY
LLLLGIPGSVVNKMFHQILFDTCLNTVSNCWPQSLVKKRKKDTLKSSQADGKRSKPHRKD
NDEMEVDENEEQEEEVHLSPQDLLKIREGVVLLVKSLLRLLLKFPLKDEPQSADNCVQMF
AKLTNFEPVIGELTFGAGQDIDDMRTMPELAYYGLWLLCSSNHGDEKVSLGRVFHRVLYV
ILMMSKGESGKPSLMMATQAVLAARDQAIGFVSHVVDELKEPALPFLRILLQHISFRMVD
KTDYRTHGAQAVAKLLAKMPCGDYASFIKWLFDYSRQSKVAYRMFALDVSMALLEQPERE
ANENLDAELVSFLSHRFLVHNMVFGRRSDASPTVRGHALTCLAQCLELPSMNATRSIKEL
FSTTSAQTVLEGNGSDGTLNSQTTQKTFKTLPFKTIEITNNDHASFESKDTMALLKRRVS
DPKTNVRKCALQAMMGLLKHNVIMLSEENLAVLSERTRDPALSVKKKALQCLMDLLAAHP
ENSLVQKAWLRGVVPAVVDAESSVQEKALECLEQTILSQVKSHGSYSYRDAQQTLTWDLL
GLLCDHCQDLGRYFSRAFTVWSKQNKFTAAFINNLISHTEAEHAAGAWLLLSKVASSCPR
LDYGKILDAWDDLVRSKNVTVTTSCHILCVIGDIGEHLNEDTKSRIVEDIITWLKSFDMP
LEVISASVETLCRLGKAEAVSDTQTFLNQHCGELVSVCEAYLSGVILNENGAQNLNEDLV
VKHLYTLGVASLHCPSKVGKRIVLLVQSVLTSSVEQQSEGSEELAGSKPLSQFKASSMPS
SVRAHAVITLGKLCLQHEELTRKYLPAFARELELCSELSVRSNVVVVMCDLCVRYTNMVD
RYVPNVSACLRDKEPLIRKQTLTMLTNLLQEEFVKWKGSLFFRFIAVLVDSDPTIASLCE
YCLVHLLLKKNPVMFSQHFIECIFHFNSYEKHKTYNKFPQTASEKAKFSLKGAQNKERRF
TIYRFLLVHFTDAQRFNITIKISQNILACFVDGELPLDGDGAAVLAETFGILSLKEIKLS
ALSGAAGAGGDEPQEDEQMAMAKAVMQVAQKKVVSQVQKKVFIESMIPIIINLKSMLEQK
RSPVLKDLMGYLQLTMQDYRSEVKEFFAADEQLAVELEYNLKMYEKEQEMEAQMVHCSLG
GDAASGGTPILGSPAPASAHRLLQTGFATPQPVGPSHRGLLTQRLAQSDRRQPAKQRSGP
HRSWVMVTGDKNFTPLDGSVKPKGGVCDRAISTPQGNINEVTFGEGVSAIFSDRRTGSKT
GEEGRVLQLISPDQQTPVPRQWNVQSPLNQKRTRQIHQ
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatacgtgctctagattttctgaaattgaaagacgtctccggaggttgggtt
gatgctgtgtgggattttgaattcactgaaactgaaccactggacgctgccattgtcata
aaaaatggatccaaggaattcaaaacgttgtacagtcacctgctaccctatatgactgac
actgaggtgtccactttaggaactgatggcacatcacaaagtgtctggacagtgttcggt
gacaatggggtctctgtcaagtcacttgtggcggtgctgtcgtactttgttttgggaggg
aagtccaaaacagccagcgttcagcaaaggataagcgctctacaggcatcctccctctac
ttactgctactgggaatcccaggtagtgtggtcaacaaaatgttccaccaaatactcttt
gacacttgcttgaacaccgtgagcaactgttggccccagagcttggtcaagaagcgcaag
aaagacactttgaagagctctcaggctgacggcaaacggtccaaaccacacaggaaagac
aatgacgagatggaagtagatgagaatgaggaacaggaggaggaggtccatttgtctcca
caggacctcctgaaaatcagagagggagtcgtcctcctggtgaaaagcctcctccggctc
ctcctcaaatttccgttgaaggatgagccacagagtgcagacaactgtgtacagatgttt
gccaagctgactaactttgagcctgttattggagaattgacctttggtgctggacaggat
atcgatgacatgaggacaatgcctgagttggcctattacggattgtggttgctctgctcc
tcaaatcatggagatgagaaagtgtctctgggccgggttttccacagagtcctgtatgtg
atcctcatgatgagcaaaggggaaagtggcaagccctccctcatgatggccacccaagct
gtcctcgctgcccgggatcaggccattggctttgtcagtcatgttgttgatgaactgaaa
gagccagcactgccctttctacggatcctcctgcagcacatatccttccggatggtggac
aagacagactaccgtacgcatggagcccaggccgtggccaagctgctggccaaaatgccc
tgtggagactacgcgtcattcataaagtggctatttgattactccagacaatcaaaggtg
gcgtaccggatgtttgcactggacgtgtccatggctctgctggaacagccagagagggaa
gcaaatgaaaatttggacgcagaactagtctccttcctgtcccacaggttcctggtccac
aacatggtgtttggccgtcgctcagacgcttcgcccacagtccgaggccacgccctcacc
tgcctggcccagtgcctggagctgccctccatgaacgccacacgcagcatcaaagagctc
ttctccaccacatctgcgcagactgtcttggagggtaacggttctgatggcactttaaat
tcacagacgacccaaaaaacgttcaagactttacctttcaagactattgagatcacaaac
aatgaccatgcaagttttgagtcaaaagacacaatggctttactgaagcgccgtgtgagt
gacccaaagaccaacgtgaggaagtgtgcactgcaggcgatgatgggcctgctgaagcac
aacgtgatcatgctcagtgaggagaacttggctgtgctgtcagaacgcacccgggacccc
gccctgtctgtcaagaagaaggccctgcagtgcctcatggacctccttgctgcccaccca
gagaacagcctggtacagaaggcatggctgcggggcgtggtgccggccgtggtggacgca
gagagctctgtccaggagaaagccctggagtgcctagagcagaccatcctcagccaggtg
aagagccacggctcctacagctacagggacgcccagcagacactgacctgggacctgctg
ggcctgctgtgtgaccactgccaagaccttggccggtacttcagcagggccttcacggtg
tggtccaagcagaacaagttcactgcagccttcatcaacaacctcatctctcacacggag
gcagagcacgcggccggggcgtggctgctgctctccaaagtggccagctcctgcccccga
ctcgactacggaaagatcttggacgcctgggacgacctggtcaggtcaaagaatgtcaca
gtgacaacatcctgccatatcctgtgcgtgatcggggacattggcgagcatctgaacgaa
gacaccaagagcaggattgtcgaggacattattacctggctgaagagctttgacatgcct
ctggaggtgatcagtgccagtgtggagactctgtgtcgactgggcaaggcagaggcagtc
agtgacacacagacattccttaaccaacactgtggagaactagtctcggtctgtgaggcg
tatctttccggcgtcatcctgaatgaaaatggagcacagaatttgaatgaggatttggtg
gtgaagcacctgtacacactaggcgtggcgtcgctgcattgtccctccaaagtgggcaaa
cgcattgtgctcctggtccagtctgtcctcacctccagtgtggaacaacagtcagagggg
tcagaggagctggctggctccaagcctctgtctcagtttaaggcttcctccatgcccagc
agcgtccgggctcatgctgtcatcactctaggtaagctgtgcctgcagcacgaggagctg
acccgcaagtacctgccggcgttcgcccgcgaactggaactgtgcagcgagttgtcggtg
cgcagcaacgtggtcgtggtcatgtgtgacctgtgcgtgcgctacaccaacatggttgac
cgctacgttcccaacgtgtcggcatgtctccgcgataaggagccgctcatccgcaagcag
accctcaccatgctcactaacctgctgcaggaagagtttgtcaaatggaagggctcgctg
ttcttccgtttcattgcagtgctggtggattctgaccctaccattgctagtctgtgtgag
tactgcctggttcacctcctgctcaagaagaacccagtgatgttctcacagcacttcatt
gagtgcatcttccacttcaactcctatgagaaacacaagacctacaacaaattccctcaa
acggccagtgagaaggctaagttctccctgaaaggagcccagaacaaagagaggaggttc
acgatctataggttcctgctggtgcacttcacagacgcccagcgctttaacatcaccatc
aagatcagccagaacatcctcgcgtgcttcgtggacggtgagctgcctctggacggtgac
ggggcggcagtgctggctgaaacatttgggatcctcagcctcaaggagatcaagctgtca
gcactgagcggagcggcgggggctggtggtgacgagccgcaggaggacgagcagatggcc
atggccaaggccgtcatgcaggtggcccagaagaaggtggtctcacaggtccagaagaaa
gtgttcatcgagagcatgattcccatcatcattaatctgaagagcatgctggaacagaag
cgctcgccagtcctgaaggacctcatgggctacctccagctgaccatgcaggactaccgc
agtgaggtgaaggagttctttgcagcggacgagcagctggcagtagagctggagtacaac
ctgaagatgtatgagaaggagcaggagatggaagcccagatggtccactgctccctggga
ggggatgctgcctctggaggcacgccgatcctgggctcccctgcccctgcttctgcccac
aggcttctccaaacgggctttgccacgccccagcccgtcggccccagccaccgaggcctg
ctcacccaaagacttgcccagtcagacaggcgtcagccagcgaagcagaggagcgggcca
cacaggagctgggtcatggtgaccggcgacaaaaacttcacacctctggatggatcagtg
aagccgaaaggaggcgtctgcgatcgagctataagcaccccgcagggtaacataaatgaa
gttacattcggggaaggagtcagcgccatcttcagtgaccggagaacaggttcaaagact
ggagaagaaggacgtgtccttcaattgatctcacctgatcagcaaactccagtgccaagg
caatggaacgtgcagtccccactcaatcaaaaaagaacaagacaaatacatcagtag
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