Salvelinus namaycush (lake trout): 120056990
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Entry
120056990 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056990
04121 Ubiquitin system [BR:
snh04121
]
120056990
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120056990
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120056990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf_UBZ
zf-C2H2_8
Endonuclease_7
MIX
zf-C2H2_2
zf-MYST
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
120056990
NCBI-ProteinID:
XP_038861247
UniProt:
A0A8U1BX60
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Position
Sna12:21987300..22167029
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AA seq
668 aa
AA seq
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MDLTKMGMIQLQNPNHPTALLKKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEVNMNDEGTEEDDERKGRQGGKTAKKHSMEGSYHSAVQQASALASMV
DQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTQGNSHHQLMTEIKTEMM
QVDEGGGHGSPRTMESSASSNGKRSGELDKNRDGPGTPTRSSVITSARELHYVREDGMGD
SQADGGQMGLEAMAGMTGMTEKHLASLYSLPTNHKNEAMLSMPASMASSLHMSPALAMSM
DFSAYGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLH
SGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTGS
DMAIFCLLCGKRFQAQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHP
YECEFCGSCFRDENTLKGHKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECK
LCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHRPEDIPPDWRIEK
TYLYLCYV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaaaatgggtatgatccagctccagaaccctaaccaccccacggccctg
ctgaagaaggctaaccagatgcgtctggcaggaaccctctgtgatgtggtcatcatggtg
gacagccaggagttccatgctcatcggactgtgctggcctgcaccagcaagatgtttgag
atcctgtttcaccgcaacagccagcattacaccctggactttctttcaccaaagaccttc
cagcagatactggagtatgcctacactgccacactccaggccaaagtggaagacctggac
gacctactgtacgcagcagagattctagaaattgagtacctggaggagcaatgcctcaag
atcctggagacaatccagtcctcagacgacaacgacacggaggtcaacatgaacgatgaa
ggcacggaggaagacgatgagcgcaagggcaggcaaggagggaagaccgccaagaagcat
tccatggaggggagctaccattcagctgtccagcaagcctcggccctggccagcatggtg
gaccagagcccctctgtctccacatccttcgggctctccaccatgagcccaaccaaagct
gccgtggacagcctgatgagcataggccagtccctcctgcagcagggctttgggggcgag
cacctgactcaaggaaactcccaccaccaattgatgaccgagatcaagaccgagatgatg
caagtggatgaaggcggaggccacgggagccccagaaccatggagtccagcgcctccagc
aatggcaaaaggagcggcgagttggacaagaaccgtgatggccccgggactccaaccagg
agcagtgtgatcacaagcgcccgcgagctgcactacgtccgggaggatggcatgggcgac
tcccaagcagatggcggccaaatgggtctggaagccatggcgggtatgacaggcatgacc
gagaaacacctggcctccttgtactcgctgcctaccaatcataaaaatgaggctatgcta
tccatgccggcctccatggcctcttctctccatatgtcccctgccctggccatgtccatg
gatttcagtgcctacgggggacttctgccccagagcttcatccagagggagttcttcaac
aagttgggggagctggctgccggtatgaagccagacggtaggaaccagcatgaacgctgc
aacgtgtgtggcgcagagctaccagacaacgaagctgtggagcaacataggaagctgcac
agcggaatgaagacctatggatgtgagctttgtgggaaacgctttctggacagcctacgc
cttaggatgcacttgctgtctcactcagctggtgagaaggccattgtctgtgaccagtgt
ggggcccagttccagaaggaggatgctctggaggctcacagacagatccacacaggctcg
gacatggccatcttctgcctgctgtgtgggaagcgcttccaggcgcagccggcactgcag
caacacatggaggtccacgccggtgtgcgcagctacatctgcagtgagtgcaaccgcacc
ttccccagccacacggcactcaaacgtcaccttcgctctcacacagcaggggaccatcca
tatgagtgcgagttctgtgggagctgcttccgtgacgagaacactctgaagggccacaag
cgcatccacaccggggaaaagccctatgaatgtaacggctgtgggaagaggttcagcctc
aagcaccagctggagactcactaccgcgtccacacaggtgagaagccgtttgagtgcaag
ctgtgccaccagcgatccagggactactcggccatgataaaacacctgcgcacccacaac
ggtgcctcgccgtaccaatgcaccatctgcctggagtactgccccagcctctcagccatg
cagaagcacatgaagggccacaggcccgaagacatccccccggactggaggatagagaag
acctacctgtacctctgctacgtctga
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