Salvelinus namaycush (lake trout): 120057013
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Entry
120057013 CDS
T07522
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120057013 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120057013 (lrwd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
LRR_8
LRR_9
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
LRR_14
Beta-prop_IP5PC_F
Beta-prop_TEP1_2nd
LRR_1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
120057013
NCBI-ProteinID:
XP_038861287
UniProt:
A0A8U1BXU1
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Position
Sna12:23818472..23831492
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AA seq
751 aa
AA seq
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MGKITEKLLLEKCTPKNTKLEQVKTLNLSKLGLKSSDLPVPLLSRLRCLEQLDLSGNRLK
EMPSGLFLPSLCSLDLTNNEMEDVTTLDTLTTLEDLRMEDNLYITVSDNYKLMILLPKLR
FYNGKDISTTANHIRYVNSENLRKRVLALWETSFSLPDCRTAEKLAIVERDFVNAVRHKV
KYGPSSMTDYTKWRVEMIAKEHLRSLTEPNKEYRDTEEPADTKENFRFPFPAKRKRSASA
VECDVTLNPQKIARASVQAEDSPHRSSRLQSIPHKAERPISTTARTHKAAQIPATPTRGK
SKLLVTPRNGLREKQHQSKEDMPLAKRTRKSARQQRSTEVKETPGKVICTKSQHSLQEPV
SLQPLHVLQCHSKRDSPDDFSTQLWACSFQPPLDYNGDVKGATRIVATCGGESVCLIDCE
TGLVMKKYKVPGEEFFSLAWSTVLMSRKGNVGMRPCSILAAGGKRGLVKLLHPRANMAYG
EFRASRKALSILCFSPRQGNLLFTGSYDKNILMWDIGGVDSYYNFKVTQLLVLETTSTPL
HFCLPPATPDTHLIAACEGGLHSYNIQLNKDPKKRSEEMEITFPVYKKDKDHDYHTIDGL
GFLTNDVVASKSHMQGSIYLWSWKDTRAQRPNNNKKKKEICAVILAELQWSSTDIPYLSL
NTCPSKGYVVCGDERGRLWMYHVTDLLKANFRSGKAIPATEILAWPLPVRKGQGPVEGPA
INSVAMDPELRYLVALSDKNMAVVWIRTESS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaataacagagaaattactgctggagaaatgcactccaaaaaacaccaaactg
gaacaagtaaagacactaaatctctccaagctcggtctgaagagcagtgacctgcctgtc
cccctgctttctcgccttcgctgtctggaacagttggacctgtctgggaacagacttaag
gagatgccctccgggctcttcctgccctccctatgctctctggacctgaccaacaatgag
atggaagatgtcaccactctggacacactgaccaccctggaggatctcaggatggaggac
aacctctacatcactgtcagtgacaactacaagctgatgatcctcctgcccaagttgagg
ttttacaatgggaaggatatcagcactacagccaaccacatacgctatgtcaacagtgag
aacctcaggaagagggtgttagcgctgtgggagaccagcttttcactccctgactgccga
acagcagagaaactagccattgtggagagggattttgtcaatgcggtgcgtcataaggtg
aaatatggccccagctctatgactgactacacaaaatggagggtggagatgatagctaaa
gagcaccttcgctctttgaccgagccaaataaagagtacagagatacagaggagcctgct
gatacaaaggagaactttaggtttcctttcccagccaagaggaagcgttccgcctcagct
gtcgaatgcgacgtaaccctaaaccctcagaaaatagccagagcaagtgttcaagccgag
gacagcccacacaggtcaagccgtctgcaaagcatccctcataaggcagaacggcccatc
agcaccacggcgaggacccataaggcagcacagatcccagccacccccactaggggcaag
tccaaactcctggtgacccccaggaacggcctgagagagaagcaacatcagtccaaagaa
gacatgccactggccaaacggactcgcaagtctgccaggcaacagcggtccacagaggtc
aaagagacgcctgggaaagtaatctgcaccaagtctcagcattcattacaggagccagtg
agtctgcagcctcttcacgtcctgcagtgtcacagtaaacgggacagccctgatgacttt
agcacccagctgtgggcctgttccttccagcccccgctagactacaatggagatgtgaaa
ggtgcgacccgtattgtggcaacgtgtggaggagagtctgtgtgcctgattgactgtgag
acgggactggttatgaagaagtataaggtccctggtgaggagttcttctctctggcatgg
tcaactgtgctgatgtcacggaagggcaacgttggcatgcggccctgcagtattttggcg
gcaggggggaagcgaggcttggtgaaactgcttcaccccagagccaacatggcgtacgga
gagttcagagcaagccgcaaagccctctccatcctctgcttcagtccccgccagggcaac
ttgctcttcactgggtcgtacgataaaaatatattaatgtgggacattggcggagtggac
agctactacaatttcaaagtcactcagctgttggtgttggagaccacctccacacccctg
cacttctgcctaccccctgccaccccagacacacacctcattgctgcctgtgaggggggg
ctccacagctacaacatccagctcaacaaagaccccaagaaaaggtctgaggagatggag
atcacattccctgtgtataagaaggacaaggaccatgactaccacaccatcgatggcttg
ggattcctcacaaacgatgtcgtcgcctctaagagccacatgcagggctcgatctacctg
tggagctggaaggacacgcgagcccagcggcccaataataataagaagaagaaggagata
tgtgctgtgatcctggcggagctgcagtggtccagcacggacatcccctacctgtccctc
aacacctgccccagcaaaggctacgtggtgtgtggtgacgaaagagggagactgtggatg
taccatgtaacagacctcctcaaggccaactttaggagtggcaaagcaattcctgccaca
gagatcctggcatggccgttacctgtgaggaaaggacagggcccagtggaaggtcccgct
atcaacagtgtggccatggaccctgagcttagatacctggtggccctcagcgacaagaac
atggcagtggtgtggataagaacggagtcttcctga
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