Salvelinus namaycush (lake trout): 120057017
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Entry
120057017 CDS
T07522
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120057017
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120057017
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GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
120057017
NCBI-ProteinID:
XP_038861297
UniProt:
A0A8U1C3N6
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Position
Sna1:complement(78636739..78652239)
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AA seq
457 aa
AA seq
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MPQKEYHSQATWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDTTRQKIVELA
HSGARPCDISRILQTHDDSKVQVLENENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA
DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQPQDGAGENTNSISSNGEDSDE
TQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFS
NRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPMPQPTTPVSFTSGSMLGRPDT
ALTNTYSALPPMPSFTMANNLPMQPSQTYSCMLPTSPSVNGRSYDTYTPPHMQAHMNSQS
MITSGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaataccacagccaagccacgtgggagtctggcgtagcctcgatgatg
cagaacaaggtctatgacatctgtgatgaaggtcacagcggtgtgaaccagctgggcggt
gtgtttgttaatggtagaccgctaccggacaccaccaggcagaaaatcgtcgaacttgct
catagtggcgcgcggccgtgcgacatctccaggattctgcagacccatgatgactcaaaa
gtccaagtgctggaaaatgaaaacgtgtccaacgggtgcgtgagtaagatccttggcaga
tactatgagactggctccataagaccgagagcgatcggaggcagcaagccgagggtagcc
actccagaggtggtggggaagatagcgcagtacaagcgggagtgcccgtctattttcgcc
tgggagatccgcgacagactgttgtcggagggggtctgcaccaacgacaatatacccagt
gtgtcgtcgataaacagagtcctccgcaacctggctagcgagaagcaacagatgggcgca
gatggcatgtatgacaagctgagaatgctcaacggtcagacaggaacttgggggacacgg
cccggctggtaccccggaacttcagtgccagggcagcccaaccaagatggctgccagcca
caggacggtgctggagagaacacaaactccatcagttcgaatggggaggattctgacgag
acgcagatgcgactccaactaaagagaaaactccagaggaaccgcacgtcgttcacacaa
gagcagattgaagcactggaaaaagaatttgaaaggactcattatcctgacgttttcgcg
agggaaagactggcagcgaaaatagatctgcctgaagcaagaatacaggtgtggttctca
aacagaagagcgaagtggaggcgggaggagaagctccggaaccagcgtcgtcaggccagc
aactcctccagtcacatccccatcagcagcagcttcagcaccagcgtctatcagcccatg
cctcagcccaccacaccggtgtccttcacatctgggtctatgttgggcagacctgacacg
gccctcaccaacacgtacagcgccctgcctcccatgcccagcttcaccatggccaacaac
ctgcctatgcaacccagccagacctattcctgcatgctgcctaccagtccgtctgtgaat
gggcggagctacgacacatatacgccccctcatatgcaggcacatatgaacagccaatca
atgatcacttctggtaccacctcaacaggactcatctctcctggagtgtctgtccctgtc
caagtcccaggcggcgagcctgacatgtctcagtactggtcaagactacaatag
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