Salvelinus namaycush (lake trout): 120057057
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Entry
120057057 CDS
T07522
Name
(RefSeq) nuclear receptor corepressor 1-like
KO
K04650
nuclear receptor co-repressor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120057057
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120057057
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120057057
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120057057
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
120057057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
120057057
NCBI-ProteinID:
XP_038861366
UniProt:
A0A8U1BPQ8
LinkDB
All DBs
Position
Sna12:27131334..27244604
Genome browser
AA seq
2470 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSLYPSHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQADGHEALEAKRPRMETVSEAHFARGALPGGI
ILPLQSHQVQDSLRANVGEVKKETQFSGMKAESQAPGGLHHVGEVPDSSPSRLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLTDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNHQITRSSQEEKSDDKPEEDKLEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAA
EEPPPPEHLLPSEPPQPSKPEPTTQKAVREPTKSAPGEPPTDPNRGAGGAAAANGETGET
SRWTEEEMEVAKKGLVEHGRNWPAIAKMVSTKSEAQCKNFYFNYKRRHNLDNLLQQHKQD
TRRARGDRDPSQSESMASADDDQNPEDSDGGENSSDTESAPSPSDPSKAGGDSQRGDGAG
GSENQWSNKGQASNGRVQEPSYGELRVKLEKSPEGETREPGSQEDGERARVAYEGHGLPK
SEPQDVDMKPGGAGEVQVKVEPDSAKEKGEPEKQREGHHSDNDSSATCSADEDVDAEPER
QRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRAAAIPPMVVPFGPGGISIGAPLS
GFAMFQHQITAVHESAHAEEKQRQDQAEPERSRQPTNCPGFTTHSPTIVDREGKPFPYMP
YDMKMALEQEAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLP
DGVRVTFSRHSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEG
AKSSVGSISLGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSRTQYEGVVRGGPMDGGISR
GNPARGSITQGTPALSGSSIAADLLKGTITKLPTEDLSSPEKAREQLAKGHVIYEGKSGH
ILSYDAIKNPREATRSPRTGHELKRSYDMMEVARGHPGREGAPFEGLISRALPRDSPHGE
SKERPIMTGSIMQGTPRTSAEVYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIK
EMGRSIHEIPRQEQPGQDPRKTPDMAANIRASMEGSISQGHPLSQLSIKHNVKSLITSPS
RLPHGHTMPPLEAMERAKYEESKAAAEQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMY
QDADARRTPVNYSTSSMSRGSPMLGRGQEGSGKPASHDRKSTMTPTQRDSVPAKSPVSGG
DPNHPMASHSPFDPHHRPMAPGEPRFHLPPHLDPALFHRAVLDPAAYMFPRQPSPTGYHN
TYQLYTMENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQPIALSYPPGARGIIDLAQ
MPPTILLPHPGGTGTPTLDRITYIPGAQPPFPPRPFNQASISPGHQAHLVATAAANQERE
REREREREHREKEREREHREREQEQRQRERERAVAAAVANDYMRGGQGQPDRPGSRGYLR
SPSPSMRSQEAQQQRPSIFQGANSKGVITPLMPAAAAAQAGARYSTAADALAALVDAAAS
APQMDVNKGKDSSKHDRDDDMSLSSSAVARRQHEQQQEADRHSMQSPYGPMSLPGGKLHP
GYAEGPSGPQGSKDKGPPSKSRIEEELRTRGKTTITAANFIDVIITSQIASDKDSRERGS
QSSDSSSSLSSSRYEIPSGGAIDVISPANSPAQSQQQQDDRDRADRERADRDRADRDRAA
QAAAQAAGMRPFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQ
DFARNQDPPQSSTTISATTTFQSAQLPVSILGPGGRAKGPSRYSPENQAQAPSHHQRPTP
SRVSPDNAPDKPRARPGKSPDRGGRGAIESYEPISPPQSYQDKQQEAREQQQSQRREADQ
PEMRGDSRSPGSVSYLPSFFTRLENTSPMVKSKKQEIIRKLNSSGVSDSDVGNAQPGTEI
FNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSSNTPSN
EARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAGGERPSSVSSVHSEGDYHQQPP
AWSWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSIQAQQPPPGGPLGPQQRVWEREPLLSE
QYETLSDSDD
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctatccccctacccagggcagcttcagcagtgagcagagcctc
tacccatcacactctgtccagtacaccttcagcaccacacgccaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcaaggtcgacgaaggccttccttgctt
tcggaattccatcctggaactgagaggcctccagagagacgtcatggctacgagcagcag
ttccacagtgtcacctcccagcagcaggctgacggccacgaggctctggaggccaagcgg
ccccgcatggagactgtctcggaggcccacttcgcccgcggtgccctgcccgggggcatc
attttacccctgcagtcccaccaggtccaggacagcctcagagccaacgtaggggaggtc
aagaaggagacccagttcagtggcatgaaagctgaatcccaggccccaggagggctgcac
catgtgggggaggtgcctgacagctcgccctccagattgtccaaggaggagctgatccag
agcatggaccgtgtggacagagagatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccagtg
acccctccccccataccacaggaacacaacaagcaccgcagcattgtccagatcatctat
gatgagaacaggaaaaaagctgaagaggcccataagatattcgaaggtcttggtcctaag
gttgaactgcccctatataatcagccatcggatacaaaagtttaccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctaatggaggcctgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaagatagccgcaccagagag
tactatgagagacagttccccgagatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccattgccagaagcgagcatgagatt
tctgaaatcatcgatgggctttctgaacaggagaataacgagaagcagatgagacagctg
tccgtcatcccacccatgatgtacgacaccgagcagaggcgagtcaggttcatcaacatg
aacggcctgacggatgaccccatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagatcttcaaagaaaagtttgttcagcacccaaaaaattttggc
ctcattgcttcttatctagagagaaagtgtgtgtccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacactggtgagacgcaactacggcagacggcgaggg
agaaaccaccaaataacacgatcctcacaagaagaaaagtctgacgataaacctgaagag
gacaagttggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggaaaagacaaagacaagtgtgacggcggggag
gacgaggacggtaaggagcagagcacgccacgcggcaggaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctctgtggcggcc
gaggagccaccgccacccgagcatctcttgccctccgagccccctcagccttccaaacct
gagcctactacccagaaggctgtgagagagcccaccaaatctgcaccgggtgagcccccc
acggaccctaacagaggagcaggaggagctgctgctgcgaacggcgaaaccggagagact
tctcgctggaccgaggaggagatggaggttgccaaaaaagggcttgtcgagcacgggcgc
aactggccagccattgccaagatggtgagcaccaagagcgaggctcagtgcaagaacttc
tacttcaactacaagagacggcacaatctggacaacttgctccagcagcacaagcaggac
acacggcgggcacggggagatcgagacccgtctcagagcgagagcatggcttcagctgac
gacgaccaaaacccagaggatagtgatggtggagagaacagctcagacacagagagcgcc
ccgtccccgtcggacccctccaaggccggaggggattctcagaggggagacggagctgga
gggtcagagaaccagtggtccaacaagggccaggctagcaatgggagggtccaggagccc
tcctacggagagctgagggtcaagttggagaagagccccgagggagagaccagagagcct
ggctctcaggaggatggggagagggcccgggtggcctatgagggccatgggctccccaag
agcgagccccaggatgtggacatgaagcctgggggggccggggaggtgcaggtgaaggtg
gagcctgactctgccaaggagaagggagagccagagaagcagagggaggggcaccactca
gacaacgactccagcgccacctgcagcgccgacgaagatgttgacgctgagcctgagaga
cagaggattttctctagtatggacaagccttcgctgctcagccctcccggctcagtgctg
atgtccacggccaagcaggcccacctcaacatgcagcagctccagcagcgcgccgctgcc
atcccgcccatggtggttccttttggtcctggcggaatttccataggagcccccctcagc
ggttttgccatgttccagcaccagatcacggctgtgcacgagtcagcccacgccgaggag
aaacagaggcaggaccaggctgaacctgagcgcagcagacaacccaccaactgccctggc
ttcaccactcacagcccgaccatagtggacagggagggtaagcccttcccctacatgcct
tatgatatgaagatggctctggagcaggaggcccagtctggtcggccaggctctccctac
aggctctctcccagggacatgagcaaggcctctcctcagcccaacgaccccaacgcctcc
cgctacagcgtgcctccagtgctccagccagctcccaaccaggtggtccagagcctgcct
gatggagtccgtgtgactttctccagacacagccgacccgccaacattccatctcctcct
ccgctcattccaacctctaaacccacagacaagccttcctttatccagggtggctccatc
tcccaggggactcctggtacgtacctgccgtctcatgctgtctacggtggcccagagggg
gcaaagagttctgtgggctccatatccctgggcctgcccaggcagcaggaccccaccaag
cctgtgtcctacattaagcaggaggagtgttctccgcgtggtcagtctgagggactcctc
tctcggacgcaatatgagggggtagtcagaggaggcccaatggatgggggtatcagcagg
ggaaacccagccagaggatcaatcacacagggcacgccagccctatccgggtccagcatt
gcggctgacctgctgaagggcaccatcaccaagctgcccacggaggacctgagtagtcca
gagaaggctcgggaacagctggccaagggacacgtcatctacgaaggcaagagtggacac
atcctctcctacgacgccattaagaacccaagagaggccacgcgtagccccaggacaggc
catgagctcaaacgctcctatgatatgatggaggtcgccagaggccaccccgggagagaa
ggagcccccttcgaagggttgatcagccgagccctgcccagagacagtccccacggggag
tctaaggagaggcccatcatgactggatccatcatgcaaggtacacccagaacctctgca
gaggtctatgaggagagcatgaagtatggcaagcagataaagagggagagtccacccatc
cgctcctttgagggagggataggtaagggtaagccctacgagggggtgaacaccattaag
gagatgggccgctccatccacgagatcccccgccaggagcagcctggacaggacccccgc
aagacccccgacatggctgccaacatccgagcctccatggagggctccatatcccagggc
catcctctgagccagttgtccatcaagcacaacgtcaagtccctgatcaccagtcccagt
aggctgccccatggtcacaccatgcccccgttggaggccatggagcgggccaagtatgag
gagagcaaggcggcagcggagcagcgagcgcgccacacctctgtggtcaactcggcaacc
tccgtcctgcgttccacccaccaggagcaaggaaagtcccagctcagcccgggcatgtac
caagatgccgacgcccgcaggacaccggtcaactacagcactagctccatgtccagaggc
tcgccaatgctgggccgaggacaggagggctctgggaagcctgcgtcccatgaccggaag
agtaccatgacccccactcagagggacagtgttccagccaagtctcctgtgtcagggggt
gaccccaaccaccctatggcctcccacagccccttcgacccccaccaccgccccatggcc
cccggagagcccaggttccacctgcctccacacctagaccctgccctcttccacagggcc
gtcctggacccagctgcgtacatgttcccgaggcagccgtccccaacgggctaccacaac
acctaccagctgtacaccatggagaacacgaggcagaccatcctcaatgattatatcacc
tcccagcagatgcaggttatcccacggcccgatgtcgccaggggcctgtcgccacgggaa
cagcaaccgatagctctgtcttaccctcccggagcgcgagggattattgatctagcccag
atgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactttggaccgc
atcacctacatccccggagctcaaccccctttccctcctaggcctttcaaccaagcctcc
atatctccaggccaccaagcccacctcgtagctactgcagcggccaaccaggagcgagaa
cgagagagggagcgtgagcgggagcatcgagaaaaagagagagaaagggagcacagggag
cgggaacaggagcaaagacaacgagagcgtgagcgagcagtggctgcagcggttgccaat
gactacatgcgtggaggtcaagggcagccagacagaccaggtagccgtggatacctgcgt
agcccctccccctctatgaggtcacaggaagcgcagcagcagcggcccagcatcttccag
ggagccaacagcaagggcgtcatcacccctctcatgccggcagcggcagcagcccaggca
ggagcccgttacagcactgcagccgacgccctggctgccctggtggacgctgccgcctcc
gcccctcaaatggacgtcaacaagggcaaggactcctccaagcacgaccgagacgacgac
atgtctttatcatcatccgcggtggccaggcggcagcacgagcagcagcaggaggcagac
agacactccatgcagtctccctacggcccaatgtctctgccaggggggaaactccaccca
ggatatgctgaggggcccagtggtccccaggggagtaaggacaagggtcctcccagcaag
tcacgcatcgaggaagagctgaggaccagaggaaagaccaccatcacggccgccaacttc
attgacgtaatcattacaagccagatcgcctcggataaggactcccgggagagaggctcc
cagagctccgactcctccagcagcttgtcgtccagtcggtatgagatccccagtggaggg
gccatcgatgtgatcagcccagccaactctccagcccagtcccagcagcagcaggacgac
agggaccgggccgacagggagagggccgacagggaccgagccgacagggaccgggccgca
caggcagcagcacaagcagctggcatgcgtccctttgacatgatccgctaccgccagtca
gcagagtcccagcagcccccctcctcccaggctgacggagggtactcccagtcccaacag
gtccccaagacccaccgggtcatgaccctggctgaccacatctcgcatatcatcacccag
gactttgccaggaaccaggaccctcctcagtcctccactaccatctctgccaccaccaca
ttccagagtgcccagctgcccgtgtctatcttgggccccgggggtcgtgccaagggcccc
agccgctacagcccagaaaaccaggctcaggccccatcacaccaccagagacccacaccc
agcagagtgtctcccgataatgcccctgacaagcccagagccagacctggtaaatcccct
gatcggggtggcaggggggcgatagagagctatgagcccatctcccctccccagagctac
caggataaacaacaagaggccagagagcagcagcaatcacagaggcgagaggctgaccag
cctgagatgaggggtgactctcgctcccctggcagtgtcagctacctgccctccttcttc
accaggctggagaacacctcccctatggtgaaatccaagaagcaggagatcattcgtaag
ttgaactcctctggtgtcagtgattctgatgttggaaatgcacaaccaggcacagagatc
ttcaacttgcctgctgtgaccagctcaagtagcgtgaaccccaggaaccactctttcagc
gacccggccagtaacctgggcctggaggacataattcgcaaggccctgatggggaacctg
gaagaaaggccagaggagcaccagggagggcctcagcccagctctaacacccctagcaac
gaggcccgccaggaggccaacccttcacctagcatgggcaaacagaaactgcagagcaaa
gccaacagccgaaagtcaaagtcgcccaacccaggccaggcatacgcagcagcaggaggg
gagcggccctcgtcagtctcttccgtccactcagagggagactaccaccagcagccccct
gcctggtcctgggaggaccggccctcgtccacaggctccatgcagttcccctataacccc
ttgaccatgcgcatgctgagcagcacaccccccacctccatacaggcccagcagccccca
cctggaggccctctggggccccagcagcgtgtatgggagcgagagcccctactgtcagag
caatatgagaccctgtcagacagtgatgactga
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integrated database retrieval system
