Salvelinus namaycush (lake trout): 120057067
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Entry
120057067 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057067
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120057067
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120057067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
zf-RING_6
RING_XB3-XBAT31
Prok-RING_4
Zn_ribbon_6
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120057067
NCBI-ProteinID:
XP_038861384
UniProt:
A0A8U1EK09
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All DBs
Position
Sna12:complement(28263297..28270184)
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AA seq
443 aa
AA seq
DB search
MKLQTQYDRWLIHPPSSPMQNLFPRSDSKRTLKSRESPTVMQPNSSELGAHQAGHGLSLT
LLTRTPAGATGGSAVPETSGEVRVPILSSGPWESCRGGASSRRSRASSRTSSHSHSHSHC
GGHQHSHSEPSEVDPADADLESGEPSTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALG
LAVGVGLFTTFLYVNKNIQTQVFLQDRRSKIECIWLLLFLASSTLLLYYTFLTETLYYCL
IFLNPAVEPLGFWEVLWVVGVTNFTLKFLIMWFKCLILLLPSNLVTYRAQGRWYMLTEEV
GQVYQAVAPTPLWFRYLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRI
FLSGEHTGAAATRSQCSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLC
RTAITDKVHKWRDGATSPYLQIY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccagactcagtatgacaggtggctcattcaccccccctcctctcccatgcag
aacctattccccaggagtgattccaaaagaacgttgaaatcgagggaatccccaactgtg
atgcagcctaactccagtgagctgggtgcccatcaggcaggacatggtttgtctctgacg
ctactgaccaggacaccagcaggggctacagggggctctgctgtcccggagactagtgga
gaggtccgggtacctatcctctccagcgggccctgggagtcatgtagaggaggggcgtca
tcccgtaggtccagagccagttccagaaccagttcccacagccactctcattcacattgt
gggggacaccagcactcccacagtgagcccagtgaggtggacccggctgatgctgatctg
gagtcaggggagcccagcacctcattcttggagctgcgctacctcttccgctgggttcag
aagagtcttcctttcataatcatcctttgtgctaaactggtcatccaacatgccctaggt
ctagctgttggagttggcttatttacaacttttctttatgtgaataagaacattcaaacc
caagtctttcttcaggatcgtcggtcaaagatagagtgcatatggctgctcctcttcctg
gcgtcctccacactcctgctttactacacttttctcactgagacactttactattgcctc
atcttcctaaacccagctgttgagcccctaggtttctgggaggtcctatgggtggtgggc
gtcaccaacttcacactcaagttcctcatcatgtggtttaagtgccttatcctactgctg
ccctctaacctggtgacctacagagcccagggacggtggtacatgctgactgaagaggtg
ggccaggtgtaccaggctgtggctcccacccccctatggttccgctacctggtcacctac
cagaaagtggatggaaatactggcctcaccctgggagttctgctggctttggtctacttc
atactcaagcttttaggattgtatggacagtgggggtctttccagaaaactgtgaggata
tttctcagtggtgagcacacgggggcagcagccaccaggagccagtgcagtgaggctggg
gacatctgtcctatctgtcaggcagagtacagagacccaagggccctcctgtgtcagcac
attttttgtgacgagtgcattgctctctggttcaaccgggagaagatgtgtccactctgc
cgcacggccatcacagacaaggtccacaagtggagggacggggccacgtcaccttacctc
caaatctactga
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