KEGG   Salvelinus namaycush (lake trout): 120057067
Entry
120057067         CDS       T07522                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
  KO
K22379  E3 ubiquitin-protein ligase RNFT1 [EC:2.3.2.27]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120057067
Enzymes [BR:snh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120057067
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120057067
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-ANAPC11 zf-RING_6 RING_XB3-XBAT31 Prok-RING_4 Zn_ribbon_6 zf-RING_16
Other DBs
NCBI-GeneID: 120057067
NCBI-ProteinID: XP_038861384
UniProt: A0A8U1EK09
LinkDB
Position
Sna12:complement(28263297..28270184)
AA seq 443 aa
MKLQTQYDRWLIHPPSSPMQNLFPRSDSKRTLKSRESPTVMQPNSSELGAHQAGHGLSLT
LLTRTPAGATGGSAVPETSGEVRVPILSSGPWESCRGGASSRRSRASSRTSSHSHSHSHC
GGHQHSHSEPSEVDPADADLESGEPSTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALG
LAVGVGLFTTFLYVNKNIQTQVFLQDRRSKIECIWLLLFLASSTLLLYYTFLTETLYYCL
IFLNPAVEPLGFWEVLWVVGVTNFTLKFLIMWFKCLILLLPSNLVTYRAQGRWYMLTEEV
GQVYQAVAPTPLWFRYLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRI
FLSGEHTGAAATRSQCSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLC
RTAITDKVHKWRDGATSPYLQIY
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaaactccagactcagtatgacaggtggctcattcaccccccctcctctcccatgcag
aacctattccccaggagtgattccaaaagaacgttgaaatcgagggaatccccaactgtg
atgcagcctaactccagtgagctgggtgcccatcaggcaggacatggtttgtctctgacg
ctactgaccaggacaccagcaggggctacagggggctctgctgtcccggagactagtgga
gaggtccgggtacctatcctctccagcgggccctgggagtcatgtagaggaggggcgtca
tcccgtaggtccagagccagttccagaaccagttcccacagccactctcattcacattgt
gggggacaccagcactcccacagtgagcccagtgaggtggacccggctgatgctgatctg
gagtcaggggagcccagcacctcattcttggagctgcgctacctcttccgctgggttcag
aagagtcttcctttcataatcatcctttgtgctaaactggtcatccaacatgccctaggt
ctagctgttggagttggcttatttacaacttttctttatgtgaataagaacattcaaacc
caagtctttcttcaggatcgtcggtcaaagatagagtgcatatggctgctcctcttcctg
gcgtcctccacactcctgctttactacacttttctcactgagacactttactattgcctc
atcttcctaaacccagctgttgagcccctaggtttctgggaggtcctatgggtggtgggc
gtcaccaacttcacactcaagttcctcatcatgtggtttaagtgccttatcctactgctg
ccctctaacctggtgacctacagagcccagggacggtggtacatgctgactgaagaggtg
ggccaggtgtaccaggctgtggctcccacccccctatggttccgctacctggtcacctac
cagaaagtggatggaaatactggcctcaccctgggagttctgctggctttggtctacttc
atactcaagcttttaggattgtatggacagtgggggtctttccagaaaactgtgaggata
tttctcagtggtgagcacacgggggcagcagccaccaggagccagtgcagtgaggctggg
gacatctgtcctatctgtcaggcagagtacagagacccaagggccctcctgtgtcagcac
attttttgtgacgagtgcattgctctctggttcaaccgggagaagatgtgtccactctgc
cgcacggccatcacagacaaggtccacaagtggagggacggggccacgtcaccttacctc
caaatctactga

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