Salvelinus namaycush (lake trout): 120057071
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Entry
120057071 CDS
T07522
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog
KO
K06788
coxsackievirus and adenovirus receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03267
Virion - Adenovirus
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
120057071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120057071
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
CTX family
120057071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
Ig_C17orf99
Adeno_E3_CR2
Shisa
EphA2_TM
FAM163
WBP-1
CCAP
RSN1_TM
Orthoreo_P10
MscL
Cadherin_C_2
Syndecan
DUF5849
TMIE
SCIMP
Tweety
Prominin
Motif
Other DBs
NCBI-GeneID:
120057071
NCBI-ProteinID:
XP_038861389
UniProt:
A0A8U1C3V8
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Position
Sna12:complement(29671768..29783544)
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AA seq
376 aa
AA seq
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MDFSISHLCSVLIILIAGVAHCLEITSQGPTSIEKASSESVKLDCQFSLAPEDSGPLDIE
WSLLASDNQKEDKVVILYSGDRAYEDYYPAVKGRAHFNSADPKNGDASINLTGLKSSDTG
TYQCKVKKAPGIRSRKMLLTVMVRPSKPRCSADGLTLEGMDVVLRCTSSEGTNPLQYTWE
KTSDNKLLPASAVLDPVGGTMNVRNASTSSSGTYRCTAKNHVGMEECILQLGITPPPNTA
GIIAGAIIAVLLALIIIAIILFCCCRARNRKKYEKEISYEIREDVPPPKSRVSTARSFTS
VGSQRSSLGSMSPSNLHEYALKPQYDKIPSVEEYERPPSHAPLPPPVASKMAGPNLSRMG
AIAVMIPAQNRDGSIV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcgatatcccacctctgctctgtattgattattctcattgcaggtgtagcc
cattgcctggagatcacgtcccaggggcccacgtccatagagaaggccagcagtgagagc
gtcaagctggactgccagttctctctggcacccgaggactctggccctctggacatcgaa
tggagcctgctggcctctgacaaccagaaagaggataaagtggtgatcctgtactctggg
gacagggcctatgaggactactaccctgcagtgaaagggcgagcccacttcaactcagct
gaccctaagaatggtgacgcctccatcaacttgacaggtctgaagtctagcgacactggg
acctaccagtgcaaggtgaagaaggccccgggcatccgcagcaggaagatgctgctgacc
gtcatggtgaggccgtccaagcccagatgctctgccgacggcctcaccctggagggtatg
gatgtggtcctgaggtgtacgtctagtgaggggaccaaccccctgcagtacacctgggag
aagaccagcgacaacaaactgctgcctgcctccgccgtgctagaccctgtgggaggcact
atgaatgtaaggaacgcgtccaccagctcctcaggaacctaccgctgcacagctaagaac
cacgtgggcatggaggagtgtattctacagcttggcatcactcctccccccaacactgct
ggtatcatagctggagccatcattgctgttctgctggccctcatcatcatcgccatcatc
ctcttctgctgctgccgcgcccgcaacaggaagaagtacgagaaggagatctcctacgag
atcagagaggacgtcccccctccgaagagccgcgtgtcgacggcccgctctttcaccagc
gtgggcagccagcgctcctccttgggctccatgtccccctccaacctgcacgagtacgcc
ctcaagccccagtacgacaaaatcccctctgtggaggagtatgagaggccccccagccac
gcacccctgcccccacccgtcgccagcaagatggccggccccaacctcagccgcatgggc
gccatcgccgtcatgatccccgcccagaacagggacggctccattgtgtag
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