Salvelinus namaycush (lake trout): 120057106
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Entry
120057106 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2-like
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057106
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120057106
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120057106
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120057106
NCBI-ProteinID:
XP_038861449
UniProt:
A0A8U1C3Y7
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Position
Sna12:32160205..32201155
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AA seq
316 aa
AA seq
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MSRPSSAGGGGGGLGSGKTGGGKHGGSGGAAASAAAAGVGAVAGSGSALPVAAVALPSAS
LPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIRNLA
MEKVASTLPFPCKYASAGCLLSLHHSEKPDHEEVCEFRPYTCPCPGASCKWQGSLEAVMP
HLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFF
AVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHL
FADNGNLGINVTISMC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctgcgggcggtgggggtggaggactcggttccgggaaaacagga
ggaggaaagcacggcggttcgggaggagctgctgcctcagctgcagccgccggagtagga
gctgtggccgggtctggctcggctctacctgtcgctgctgttgccttgccctcagcatcg
ctacctgggcaatctgctgaacttacagccttgttcgagtgcccggtttgttttgactac
gtcctgccaccgattctgcaatgccaggccggacatctagtttgcaaccaatgtcgtcaa
aagctgagttgttgtccgacttgtcgcggccctctcaccccgagtatcaggaacttggct
atggaaaaagttgcttctactctaccgtttccttgtaagtacgcgtcagccggatgcctg
ctctccctccaccacagtgagaagcctgatcacgaggaggtgtgtgagttccgtccctac
acctgcccgtgccccggggcctcctgcaagtggcagggctccctggaggctgtcatgccc
cacctgatgcacgcccacaagtccatcaccaccctgcagggagaggacatcgtcttcctg
gccacagacatcaacctgccgggggccgtggactgggtcatgatgcagtcctgcttcggc
caccacttcatgctggtcctggagaagcaagagaagtacgagggccaccagcagttcttt
gccgtggtgctgcttatcggaacgaggaagcaggccgagaacttcgcctaccgcctggag
ctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatccacgacggt
gtggcggccgcaatcatgaacagcgactgtctggtctttgacacgtccatcgctcacctg
tttgccgacaacggcaacctggggatcaacgttaccatctccatgtgctga
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integrated database retrieval system
