Salvelinus namaycush (lake trout): 120057141
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Entry
120057141 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120057141
00071 Fatty acid degradation
120057141
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120057141
09143 Cell growth and death
04216 Ferroptosis
120057141
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120057141
03320 PPAR signaling pathway
120057141
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120057141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120057141
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120057141
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120057141
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120057141
Exosomal proteins of breast cancer cells
120057141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120057141
NCBI-ProteinID:
XP_038861519
UniProt:
A0A8U1EK46
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All DBs
Position
Sna12:complement(33724562..33739112)
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AA seq
710 aa
AA seq
DB search
MTFKVDMHYVVFLPVYLLMWLYTLITFIPWYFLTNAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNADCLGTRELLNEENEMQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRHNFPLVTL
YATLGEEAVAYGLNECGATHLITSAELLETKLKNVLPDMRNLKHVIYVDNKSISRAGYPE
GIQIYSMQAVQELGAKPDNLSVAVQRPQPTDLAVVMYTSGSTGRPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NMLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHSDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIDNI
CAYANSDQNYVISFVVPNQKQLTTLANNNGISVAWEEICNHPAMEEEVLKAIKEVAASIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaagttgacatgcattacgtagtcttcttgcctgtgtacctattgatgtgg
ctgtacactctcatcacgtttatcccatggtatttcctcactaatgctgggaagaagaaa
accatggccaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacgcagactgcctgggtaccagggag
ctcctaaatgaggagaacgagatgcaaccgagtggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgatgaggtggaccagatcatcagccatctaggtagt
ggactagcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacacaactttccattggtcactctg
tatgccaccctgggggaggaagctgtggcctatgggcttaatgagtgtggggccacacac
ctgatcaccagcgctgagctactggagactaaactcaagaatgttttgccagatatgcgc
aacctgaagcatgttatatatgtggacaacaagagcatcagcagggcgggctaccctgag
ggcattcagatctacagcatgcaggcagtacaggagttgggagccaaacctgacaacttg
agtgtagctgtgcagcgcccccagcccacagatctggccgtggtcatgtacaccagcggc
tccacaggacgacccaaaggagtcatgatcatccacagcaacctgatcgctggcatgacg
ggccagtgtgagaggatcccaggactggggccaaaggatacctacattggctacctgcct
ctagctcatgtgctggaaatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttctccacaaacactctctgaccagtcaacaaaaatcaagaagggcagtaaa
ggagactgctctgtgttgaggcctactctgatggcagctgtaccggaaataatggaccga
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggacacttttt
aaactgggctacaactacaaactggaacagatcaaaatgggctacgatgccccactctgc
aacatgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggagcgcccctgtcctccgccacccagcgcttcatgaatatctgcttctgctgc
cccgtgggacagggctacggcctcacagagacctgcggagcaggtaccatcacagaggtt
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtgaaactacga
gactgggttgagggcggatacaccagccaggaccaaccccacccccgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagcgagcacctgaacaatgacttc
tgggtagatgagcagggccagaggtggttttgtaccggggatgtgggggagatccactct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactacaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaagaactgcccccttattgacaacatc
tgtgcatatgcaaacagtgaccagaactacgtgataagctttgtggtaccgaaccagaag
cagctgacaactctggccaataacaacggcataagtgttgcctgggaggagatctgtaac
cacccagccatggaggaggaggtcctgaaggccatcaaagaggtggctgcctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctaagcccagagccctggactcctgag
actggcctggtgacagatgcattcaaactgaagaggaaggagctgaagaatcactttcag
actgatatagagagaatgtacggaggaaagtag
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