Salvelinus namaycush (lake trout): 120057190
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Entry
120057190 CDS
T07522
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120057190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120057190
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120057190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
120057190
NCBI-ProteinID:
XP_038861601
UniProt:
A0A8U1EUZ9
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Position
Sna12:complement(36847848..37198033)
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AA seq
406 aa
AA seq
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MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQQSPAHYSVPHGYPN
IVATYGRGYTGFAPSYSYQFPGFPATAYGPVAAAVAAARGSGFPDYGFYSAPSDQRGAPC
SFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKSPGGNPPRPGGFPGANSPGPV
AELYGPGGQDSNVGNYISAASPQPGSGFGHSMAGPLIATAFTNGYH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatctggaagcccaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagttggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgt
tccagaggatttgggttcgttacgtttgcagatgctgccagtgtagataaagtcttagct
caaccacaccacgaattagactcaaagacgattgatcctaaggttgccttcccccgacgc
gctcaacctaagatggtcacaagaacaaagaaaatatttgtgggcggattgtcagccaac
acggtagtggaagatgtgaagcagtattttgaacagtttgggaaggtagaagacgccatg
ctcatgtttgataaaactactaacagacatagaggattcggctttgtaactttcgagggt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggcacgcgagggagggcc
aggggcctgccctacaccatggacgccttcatgctggggatgggcatgctgagtgagtat
ggaccaacactactccagcaaagtccagcacactactcagtcccacacggttaccctaac
attgtggcgacgtacggccgtggatacactggattcgccccgagctacagctatcagttc
cctggcttcccagcgacggcgtacggaccggtggcggcggcggtggcggcagcgcgtggc
tcaggctttcccgattacgggttttactctgcgcccagtgaccagaggggggcaccctgc
tcctttgcggactatggctccctggggccccaggcggctcagatgctgcacagtgagcat
gccacctccgcctgcaactcccccctccagcacctgcacagcccggatcagtttaagagc
ccagggggaaacccacctcggcctggaggtttccctggtgccaacagccctgggcctgta
gccgaactgtacggccctggaggccaggactccaatgtgggcaactacatcagtgctgct
agcccccagcctggctccggcttcggccacagcatggcaggcccgttgattgcgacagct
tttacaaatggataccattga
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