Salvelinus namaycush (lake trout): 120057210
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Entry
120057210 CDS
T07522
Name
(RefSeq) F-box/WD repeat-containing protein 11-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04114
Oocyte meiosis
snh04120
Ubiquitin mediated proteolysis
snh04218
Cellular senescence
snh04310
Wnt signaling pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120057210
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120057210
04340 Hedgehog signaling pathway
120057210
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120057210
04218 Cellular senescence
120057210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057210
03036 Chromosome and associated proteins [BR:
snh03036
]
120057210
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120057210
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120057210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
CFAP251_N
F-box-like
Beta-prop_Aladin
Beta-prop_SPT8
PAC11
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
TRM82_WD
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
DUF7899
DUF4508
Motif
Other DBs
NCBI-GeneID:
120057210
NCBI-ProteinID:
XP_038861647
UniProt:
A0A8U1BYC4
LinkDB
All DBs
Position
12:39596656..39607794
Genome browser
AA seq
543 aa
AA seq
DB search
MEPEMEDKTLELMNTTFMDSQTDDLSSKKITVFKVRQQTTGPRPDSHRSVMTITNGPMTG
SRKRPSEGNYEKEKDVCIQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF
ITALPAQGLDHIAENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWK
GLSERHQWEKYLFKNRTTEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSEN
SKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSD
STVRVWDVNTGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVL
VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSG
SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAP
ASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTY
ISR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaacgttggagctgatgaacaccactttcatggactcc
cagacagatgacctctcatcaaagaagatcacagtgttcaaggtgaggcaacagaccacg
ggtccacggccagacagtcaccgaagcgtaatgacgatcactaacggtccgatgacgggc
tcaaggaagcggccatcggaagggaactatgagaaggagaaggacgtgtgcatccagctg
tttgatcagtggtctgaggctgaccaggtggagtttgtggaacacctgatctcacgcatg
tgccactaccaacacggccacatcaactcctacctcaaaccaatgctccaaagggacttc
atcactgcactgccagctcagggtctggaccacatagcggagaacatcctgtccttcctg
gacgcacgctcgctgtgctcggcagagctggtgtgtaaggagtggcagagggtcatctca
gagggaatgctgtggaagaaactcatagaacgcatggtccgtacagaccccctctggaaa
ggcctgtcagagaggcaccagtgggaaaagtacctgttcaagaatcgaaccacagaagtc
ccaccaaactcctactaccgttccctgtaccccaaaatcatccaggacatagagacaatt
gaggccaactggaggtgtggtcggcacaatctacagcggatccagtgtcgctcagagaac
agtaagggggtttactgtctgcagtatgacgacgacaagatcatcagcggtctcagagac
aactccatcaagatctgggacaagcagtctctggagtgtctgaagatcctgacgggtcat
acaggctcagtgttgtgtctgcagtatgatgagagggtcattgtcaccgggtcctcagac
tccaccgtcagggtgtgggatgtgaacactggggaggtgctgaacactctgatccaccac
aacgaggcggttctccacttgcggttctgtaacggtctgatggtgacgtgctcgaaggac
cgttccatcgccgtgtgggacatggcctcgcccacagacatcagtctgcgccgcgtgctg
gtcggccacagagcagcggtcaacgtggtggactttgacgacaagtacatcgtgtcagcg
tccggtgaccgtaccatcaaggtgtggagcaccagcacgtgcgagtttgtacgtacgctg
aatggccataagagaggcattgcctgtctgcagtacagagacagactagtggtcagcggc
tcctcggacaacactatccggttgtgggatattgagtgcggggcatgtttgcgggtattg
gaaggccatgaagagttggtccgctgcattcgcttcgacaacaaaaggatcgttagcgga
gcctacgatggtaaaatcaaagtatgggacctacaagctgctctggaccctcgcgcccct
gccagcaccctctgtctgcgcacactggtggagcactctgggcgtgtattccggctacag
tttgatgaattccagatcatcagcagttcccatgacgacactatcctcatctgggacttc
ctgaacgtgtcgaccaatggacagactgagggcaggtcgccctctcgcacgtatacatac
atctccagatag
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