Salvelinus namaycush (lake trout): 120057215
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Entry
120057215 CDS
T07522
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120057215 (gigyf1b)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120057215 (gigyf1b)
Surveillance factors
Other surveillance factors
120057215 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Beta-prop_WDR11_1st
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120057215
NCBI-ProteinID:
XP_038861669
UniProt:
A0A8U1EK90
LinkDB
All DBs
Position
12:40437093..40454370
Genome browser
AA seq
1023 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGGVTSPPPSPAMPKSKLADYRYGREEMLALYIKDNKPPEDM
QDKEFAAIMQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGAAPVGVARGRGG
CIRGGRGRGRGEGAFYQRAPGGPDEGEVGFGRGREMLRSQSWDDRAERPRFEKPIRCAEV
VRPGFEEAGPLGRKDSWRADSDNWRTLREEEEEAAAGGEQPAWRVAGSRRDDGGPRSAGW
RDRGGRRKFEFDFRDGEGPRRESDRDGLPEWCTEEEDGEMGTFDSSGAFMCIKKDCKDTI
TEEDLEFEALEEEEEENDQGGKDNYADRDECEAAGEGEDKYKTPSPPAISGSPPSDPLPA
PCATQAPISHPAKTNYVPAEGCPLPERGVQLSPDPPATTSSLMPPPSGSLLPSTGGEAEE
DEGMKHLQQEAEKMVASLQDTSLEEECFTQALQESHTITSHSHTHPAPHSHTHAAGHTHS
HSTHRDCALPLSHEAAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFTMTLLVKRGCDEGF
QPLGDVIKMWGRVPFSPGPSPPPLLVRQPPPSRGSSGNMDQELLKKHLEQAATAALYQQL
QMRFQHMNRSGDSSMMPSMNRSMSVPDNGSMWDMHTSASQQSGGEANLWDLTMSHSTQGP
SLEQLQKLQDRREAELRAKREEEERKRQVEKRRQQEEQKRRDEEELYRRKQQCRQQQELI
MKLLQQAQPGAPGCVSGSGWSGSQASALSKQGKSLGLLELETERLLKQQAQHQRAQHQRE
RHGGLSMGQWGEGSVGMWSGGGMEPKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLS
EQYMLRKKRTEEEDKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYL
KEVESPYEVHDFIRSYLGDTVEAKEFAKQFLERRAKQKANHQRQQQQQQLSKEVSGLSMN
NFPIQSMFQAAQMGKGGMYDSQAAKMKKKQTMMLHSDPSILGYSFLGAGERMNLGEMETV
EDY
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatggctccgtgcactatccagagggggg
ggtgtgacgtccccccctccttctccagccatgccaaagtccaagttggctgattaccgc
tatggccgcgaggagatgctagcactttatatcaaagataacaagcccccagaggacatg
caggataaggagtttgctgctatcatgcaggatgagcctgtgcagcctttggccctggag
cctctaactgaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctg
aggctgatgggaaagggaggcggggctgcccctgtaggcgtggctaggggccgtggagga
tgcatcagaggaggtagagggagagggagaggtgaaggtgcattctaccaaagagctcct
ggaggtcctgatgaaggagaggtgggcttcggtcgtggccgagaaatgctccgcagccaa
agctgggatgaccgagctgagaggccaaggtttgagaagccaatcaggtgtgctgaagta
gtgcgtccagggttcgaagaggcggggcctctgggcaggaaggactcctggcgtgccgac
agcgacaactggcgtaccctccgagaggaggaggaagaggcagcagcaggaggagagcag
ccagcctggagagttgcaggatcccgtcgtgatgatggaggtcctcgttctgcaggctgg
cgtgatcgtggcggccggaggaagtttgagtttgacttccgtgacggcgagggcccccgc
agggaatccgacagggacggccttcctgagtggtgcaccgaagaggaggatggagagatg
ggaacctttgactcctctggggccttcatgtgcatcaagaaagactgtaaggacaccatc
actgaagaggatctggagtttgaagctctggaggaagaggaggaggagaatgatcaggga
ggcaaggacaactacgctgacagagatgaatgtgaagcagcaggtgagggagaagataag
tacaagactccttctcctcctgccatctctggctctccaccttcagaccctcttcctgcc
ccctgcgccacacaggcacccatctcccatcccgccaaaacgaactatgtgcccgctgaa
ggctgcccacttccagagaggggtgtgcagctcagcccagacccccccgccaccacctcc
agcctgatgcctcctccctccggatctctcctcccttcaacagggggagaagcggaggag
gatgaaggcatgaagcacctgcaacaggaggctgaaaagatggtggcctcactgcaggac
acgtcccttgaggaggagtgtttcactcaagcactacaggagagccacaccatcacctct
cactctcacacacacccagccccacactcacacacgcacgccgctggacacacacactct
cactcgacccatagggactgtgccctgcccctctcccacgaggcagccatgaagtggttc
tacaaggacccccagggagagatccaaggtcccttctccacagtggagatgtgtgagtgg
ttccaggccggctacttcaccatgaccctgctggtaaagaggggttgtgatgagggcttc
caacccctgggtgacgtcatcaaaatgtggggccgcgtgcccttctcccccggcccctcc
cccccgcccctcctggtgagacagcccccaccatctcgggggtcctctggcaatatggac
caggagctgctgaagaaacatttggagcaggcagccactgcagctctataccagcaacta
cagatgaggttccagcacatgaacaggagtggagattctagcatgatgccctcgatgaac
aggtccatgtcagtacctgataatgggtccatgtgggacatgcatacctcggcctcccag
cagtcaggtggtgaggccaacctatgggacttaaccatgagtcattccactcaggggcca
tctctggagcagctacagaagctccaggaccggcgtgaggctgaactcagggccaagcga
gaggaggaggagcggaagcggcaggtcgagaagaggaggcagcaggaggaacagaagagg
cgtgatgaggaggaactgtacaggcgtaagcagcagtgtcggcagcagcaggagctgatc
atgaagctgctgcagcaggcccagcccggggccccagggtgtgtctctgggtcagggtgg
agtggctcccaggcctcagccctctccaaacaaggcaagagcctcggcctgctggagctg
gagaccgagaggctactcaaacagcaggcccagcaccagagggcccagcatcagagagaa
aggcatggaggcttgtctatgggccagtggggtgaggggtctgtgggcatgtggtctggt
gggggcatggagcccaaaggcagctctggagggatgggtgtctgggaggaggctgtgaag
aaccaaaacagcctccgcaatatgggcatgaagaacagccgcagcagcccatctctcagt
gagcagtacatgctgaggaagaagcgtacagaggaggaggacaagctgctgaaactgctg
cagggcatgaagccccaggatggcttcaccacctggtgtgaacagatgctacacgcactt
aacacctccgctaacaactcctcctcctcactggacgtggcaaccatcgtggcctacctg
aaggaggtggagtctccctacgaggtccatgactttatccgctcctacctgggcgacacc
gtggaagccaaagagttcgccaaacagttcctggagcgccgagccaaacagaaagccaac
caccagagacaacagcagcaacaacagctatcaaaagaagtttcagggctgtccatgaac
aactttcctatccagtccatgttccaggcagcccagatgggaaagggaggaatgtatgac
agccaggctgcaaagatgaagaagaaacagaccatgatgcttcactctgaccctagcatc
ttaggatattcattcctgggcgctggggagagaatgaacctgggcgagatggaaacagtg
gaggattattga
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