KEGG   Salvelinus namaycush (lake trout): 120057218
Entry
120057218         CDS       T07522                                 
Name
(RefSeq) period circadian protein homolog 1-like isoform X1
  KO
K21944  period circadian protein 1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snh03400]
    120057218
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120057218
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120057218
NCBI-ProteinID: XP_038861675
UniProt: A0A8U1ERG2
LinkDB
Position
Sna12:complement(40640865..40649901)
AA seq 1512 aa
MSDENAYTTSGNDTSGVSLAEDVVAGQEAVSQSPESVLSQTGSSGSSNGKRTRSGGKSSP
KSSNSDDTDSHLSGNDSAEREVEGHMGHEASTCSSSHNGKDSAMETTESKSSNSHSTSPP
NSSMVYSLLSGSSEQDHPSTSGCSSGQPARLQTQRELLKALKELKIRMPADHRTKGRSST
LASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFS
VGVSFLSGKVVYISPQASPMLRTKPERLQGALFSELLAPQDVSTFYSSTAPCRLPPWASC
TGSMTSPVDCTQEKSMFCRISGGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIA
EKVHSGYEAPRIPADKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDD
RPVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKV
RTSPLNEDVFTPTVEVEVRAMSPEIPRLSEQIHRVLVQPVHSGGSQGYCSSHGSHPQRPS
PGSSSGSNSPSTKELILKTIQRPQQMTFQQMCKDVHMVKTNGQQVFTKSRNRPALRKHAS
TGALVVPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVP
NTVKRKCGSSSCTTSSTSDDDKQRELPGTAKDLGGPQGNEGSKGGPQMSPLVLHCKAKSV
VSVTSQCSFSSTIVHVGDKKPPESDIVMMEERPATPTLTVTSPATNNAITMAVTPWPLAL
PSPAPPSPALPERDGRRSAGCSGRLGLTKEVLSAHTQQEEQVFLSRFRDLGQLRVLDPGP
PSLRGHTTTPKGVRSSKDYPAGGHGRRRGRGGKRLKHQQEGSQRAMNGSFRREGQGPQGL
TFPMGQPLMMQGPLTSSSSWPTSEASLPPAVAQYPPGVLPFFPLYPSVQQQVLAHTGVNP
NAMQMGYPSPQPGLQYPMHANQMPMPMAPPMMVVLPNYMFPQLNGGVPQLNTAMPQYNTS
IPHLCPGIPGMAQLNQALPQFKQTIPLPQLNPGLAQFNPAMTQMNGMPCVSPVLAQLNPS
QVKPTLSMIPQHCYDPSPALPFPNPIPIPGLPGFALPEMDPTFVQHGNSRSSTPQSTCQA
PLEGTDSPIFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTFPPPGSVSQFGGQGSVKRS
MKSDAREDDNDDADDQDAMSTSSDLLDLLLQEDACSGTGSAASASGSSGSGSNGCSTSGS
GTRSSNTSKYFGSVDSSENDHSHKQAPGGAEEAQLMKYVLQDPIWLLMANTDDKVMMTYQ
MPTRDKETVLREDGMILRAMQKQQPRFTEEQKRELIQVHPWMGTGRLPQAINSPTCTGCG
SPPTTSAPRPLNVELQDMDLTGVLQLQEETPVTMATDTHDTSIPPPQAPQTETKGGEGEQ
EGDCKDTRVKELEVSSSSGTEKGDSGCKRQPRSSIWPMTLKHNALGQPGAKVTVNVLCLN
KEVNMDKESKNT
NT seq 4539 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatacaccacttctggaaatgacactagtggagtaagtttagca
gaagatgtggtggcaggacaagaggcagtctcccagtcccctgagtctgtattgagtcag
actggcagctctggcagctccaatggaaagaggactcggtctgggggcaagtcctccccc
aagtcctcaaactctgatgacaccgattcccacttgagcgggaacgactcagccgagaga
gaagtggaaggtcacatggggcatgaggcatcaacctgcagcagctcccataatggaaag
gactctgccatggagacaaccgagagcaaaagctccaactcccacagcacttcccctccc
aacagctctatggtctacagcctgctgagtggcagctcggagcaggaccacccgtccacc
agcggctgcagcagtggccagccggcccggctgcagacccagagagagctactcaaggcc
ctgaaggagctgaagatccgcatgcctgcagaccaccggacaaaaggccgctccagcact
ctggcctccctgcagtacgctctcaactgtgtcaaacaagtcagagcgaatcaggagtat
tatcaccagtggagtgtggaggagagccacggttgcagtctggacctctcagccttcacc
acagaggaactggacaacatcacctctgaatacacactccagaacacggacacattctct
gttggagtgtccttcctctctgggaaggtggtgtacatctccccccaggcctctccaatg
ctgcgcactaaacctgagcgactacagggggcgctcttctctgagctgctggccccccag
gacgtcagcactttctacagcagcacggctccctgccgcctgcccccctgggcctcctgt
actggctccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatc
agtggtgggagggacagcgagggggaggtgcggtactaccccttccgtatgaccccctac
cagctgacactgcgggactctgatatgtcccagccacagccctgctgcctgctcatcgct
gagaaggtgcactcaggatacgaagctccccgtatcccagctgacaagaggattttcacc
accagccacacccccagctgtctctttcaggaagtcgatgaaagggctgtgccgttgcta
ggctacctgccccaggacctggttgggacccctgttctcatgtacctccaccctgatgac
aggcctgtcatggtggccatacacaagaagattctccagtcagcgggccagccctttgaa
cactcgccccttcgtatgtgtgcccggaacggggagtatctcaccatagataccagctgg
tcctccttcgttaacccctggagccgcaaagtggccttcattgttggtcgacacaaagtc
agaacgagtcccctgaacgaggatgtgttcacgcctactgtggaggtggaggtgcgggcc
atgtctccagagatccccaggctcagtgagcagatccaccgcgtgctggtgcagcctgtc
cacagtggtggctcccagggctactgcagctcccacggatcccacccacagaggcccagc
ccgggctcctcgtcaggcagcaacagcccctccaccaaggagctcatcctgaagaccatc
cagagaccacagcagatgacattccagcagatgtgtaaggacgtccacatggtgaagacc
aatggtcagcaggtcttcaccaagtcccgcaaccgcccagcactccgcaaacacgccagc
actggagccctggtggtgccagagaatttaaacaaggacttgggacctattggagctctg
gggccaactaaaaccctggcctcagtgcagtcaaggaaagacccgtcagccaactactcc
taccagcagatcaactgtctggacagcatcgtacgctacctggagagctgcaacgtcccc
aacacagtgaagaggaaatgtggctcctcctcctgcaccacgtcatcaacgtcagacgat
gacaagcagagggagttgcctggaacagctaaagatctcggaggcccccagggtaatgaa
gggtctaaaggggggccacagatgagccctctggtgctgcactgcaaggctaagagtgtg
gtctctgtcacgtcccaatgcagcttcagcagcaccattgtccacgtaggcgacaagaag
cccccagagtcagatatagtaatgatggaggagagaccagccacccccactctcaccgtc
acctctccagccactaacaacgccatcacaatggcagtgaccccctggccgttggccctg
cccagcccggcaccacccagccctgccctgcccgagagggacggccgcaggtcagctgga
tgctcaggccgcctgggtctgaccaaggaggtgctgtctgcccacacccagcaggaggaa
caggtattcctgagccgcttcagagacctgggacagctacgtgtgctggaccccggccct
ccttctctgagaggacacaccaccacacccaaaggagtgcgcagctcgaaggactaccca
gcaggtggtcatggacggaggaggggccgcgggggaaagaggctgaagcaccagcaggag
ggctcccagcgtgcgatgaacggtagtttcaggagggaagggcaggggccccaaggcctc
acattccccatgggtcaacccctgatgatgcagggacccctgacctcgtcctcttcctgg
cccacctctgaggccagtctccctcctgccgtggcccagtaccctccaggagtcctgccc
ttcttcccactctaccccagcgtgcaacaacaagtcctggcccacaccggagtgaacccc
aatgccatgcagatgggctaccccagcccccagccaggcttacagtaccccatgcatgcc
aatcagatgcccatgccgatggctcccccaatgatggttgttctgcccaactacatgttc
cctcaactcaacggaggtgtaccacagctcaataccgccatgcctcagtataacacatcc
ataccgcacctttgccccggtatccctggtatggcacaacttaaccaagcactaccgcag
ttcaaacagactatcccactaccacaactcaatcctggattggctcagttcaaccccgct
atgacgcagatgaatggcatgccttgtgttagtcccgtcctagctcaactcaacccgtca
caggtcaaacctactttgtcgatgatcccccaacactgttacgatcccagcccagcatta
cctttcccaaatcccattccgattcccgggcttcccggctttgccttacccgagatggat
cccacctttgtccaacacggcaactcccgctccagcacccctcagtccacgtgccaagcc
cccctggaggggacagactcgcccattttccagtcccgatgctcctcccccctcaacctg
ctacagctggaggagttgccaggcaaccgccaggagggcatgtcgacaggggcgcagcag
acatttcccccacctggctcggtatctcagttcggaggtcaaggttctgttaagcgaagc
atgaagagtgacgccagagaggacgataacgatgatgctgatgaccaggacgcaatgtcc
acctccagtgacctgctagacctactattgcaggaggacgcctgctcaggcaccggctcg
gccgcctctgcctccgggtcctcaggctctggctctaatggatgcagcacctcagggagt
ggcacaagaagcagcaacaccagcaaatactttggcagcgttgactcgtcggagaacgac
cattcccataagcaggcaccagggggggctgaagaggcccagctcatgaaatatgtcctt
caggaccctatctggctccttatggccaacacagatgacaaggttatgatgacgtaccaa
atgcccaccagggacaaggagactgttctaagggaggatggtatgatactgagggcgatg
cagaaacagcagccgcgcttcactgaggagcagaagagagagctgatccaggtccacccc
tggatgggcaccggacgcctgccacaggccatcaacagccctacttgtacagggtgcggt
tctcctcccactacctcagccccccggccccttaatgtggagctgcaggacatggatctg
acaggggtcctccagctacaggaagagaccccggttaccatggcaacagacacacatgac
acctccatcccaccaccacaagcaccccagacagagactaaggggggcgagggtgagcag
gaaggagactgtaaggacaccagagtgaaagagttggaggtgtcgtcatcatccggaaca
gagaaaggggactctggctgtaaacggcaaccgaggagttctatatggccaatgactcta
aaacacaatgcattgggacaaccgggagccaaggtcactgttaatgtgttgtgtttgaac
aaagaagtgaacatggataaggagtcaaagaatacctga

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