Salvelinus namaycush (lake trout): 120057260
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Entry
120057260 CDS
T07522
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120057260
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120057260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
120057260
NCBI-ProteinID:
XP_038861738
UniProt:
A0A8U1BTE0
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All DBs
Position
Sna12:complement(42372421..42406269)
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AA seq
1273 aa
AA seq
DB search
MHSLIISHLLVIWLGVQRLAWCAERASTRERFKVVIAPLICKRICLKGQCQDTCEQGNNT
TLIGENGQSADTLTGPGFRVVVCPLTCMNGGVCSSRTHCLCPPGFTGRLCQFPLRQMPEA
QAARGNKQPVYTLSVLPDGQSQGEQAAMGRPQLTQTHSVFTLPLAQGAGHHSSEVQFNVR
VHHAHDTSVVIHPLDQSDSKPPHKTVTRLTPQTHKPRGRCFQETTPKQACSSTPLPVLTN
QEDCCGSVGNSWGQNKCYKCPKLPYPGVKLQTIIEDYGSTCPQGYKRLNSTHCQDINECT
MHGVCQNGECLNTQGSFLCACKPGFTLDRTRCVESPSPVEQGQCFLIATEAGRCEHALPT
SLSQEMCCCTVGKAWGSNCERCPQDGTASFSKICPAGKGYFLHSVRETVAFPPQIHSSLE
QVPLKPDKKKDKVKHPEEPPETTTPMQLSPISTHGPRVPVIITKPTPPPIIRLNPGSDPL
EVAQTQVSPETDECRLNRNLCGHGECVNVHTGYKCECYAGYRLHPQRNACVDDDECDAEP
CGHSRGICINTEGSYRCRCLHGYKLLVYHGKLRCIDANECSKPDICGQGGQCVNLPGSYK
CECHKGFRSKSQRQPACEDINECLDPNSCPNDQCENTPGSYECVPCLPGHQAQGGVCYDV
NECQKRGVCPNGRCENLPGTYRCLCNEGFLPAADSKGCRDIDECEDDRLCANGRCVNTEG
SFQCQCYPGYQRTQEGSHCEDINECERPSNCQRGRCINSMGSYRCECQKGYMLVGGRRCQ
DIDECATDRGLCQPHGVCENRQGSYVCVCKDGFILSEDKHSCEEIEVAVEDKKECYLNLD
DTVFCDSVLATNVTKQECCCSIGVGWGDHCEIYPCPVYHSSEFHSLCPVGRGFYHEEGVT
EYGLSVHRDIDECVLFSNEICKEGRCMNTQPGYECYCQQGFYYDSNLLECIDVNECHDES
LCTNGQCKNTRGSYYCTCKSPWIYEASNKKCIIPTVAGVDECQDSLNCKNGHCVDTPGSY
YCICSPPWILATDRNSCVTPEEQADINECQDPSYCKNGRCVNTPGSFHCICTQPLTFSAA
LKQCVYDDRTAAHKDVCFLQVDEDLICSQPRNGLVVTYSECCCHYGRGWGPECRTCPQRN
SGIFNRLCEMHLETESDGEGDFLAAFANYNPEGDSSEEDSDECSCANGRCVRSYLGTMCE
CNTGFRLDHSRTRCTDIDECAEPGVRVNPCKNARCVNTIGSFKCYCKNGFVPARRPNICV
PGTKAQHTRTRAL
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgcattctctgatcatttcccatctgctcgtaatctggctgggtgtccagaggctggcc
tggtgcgcagagcgcgcatccacccgggagcgcttcaaagtggtcatcgcccctctcatc
tgcaagaggatttgtttaaaaggccagtgccaggacacttgtgagcagggcaacaatacc
acactgataggcgagaacggacagtcagcggatactctcacagggcctggattcagagtg
gttgtatgtccactgacctgcatgaatggaggggtgtgcagctcgcggacccactgcctg
tgcccgccaggttttactggtcgcctgtgccagttcccgctccggcagatgcctgaggcc
caggcggcgcggggcaacaagcaacccgtctacacgctgtcagtgctgccagacggccag
agccagggcgagcaggcggccatggggcgaccacagctgacacagacccactctgtgttc
acccttcccctggcacagggggcaggccaccactcatcagaagtgcagttcaatgtccgt
gtccaccatgcacacgacacatccgttgtcatccatcctctcgaccaatcggattcaaag
ccacctcataaaaccgtgacacgcttgaccccccagactcacaaacccagggggcggtgc
ttccaggagaccacgcccaaacaagcttgtagcagtacccctctccctgtactgaccaat
caggaggactgctgtggaagtgtcgggaactcttggggacaaaacaaatgttataaatgt
cccaagctaccatatcctggggtgaagctgcagaccatcatagaagactatggttccacc
tgccctcagggctataagagactcaacagcacccactgtcaagacatcaacgagtgcacc
atgcatggggtgtgtcagaacggagaatgcctgaacacccagggtagtttcctgtgtgcc
tgtaagcctggcttcaccctggacaggaccagatgtgtggagtctccttctccggtggag
cagggccagtgcttcctcatagcaacagaggcgggtcgctgtgagcacgccctacccacg
tccctgtcccaggagatgtgctgctgcaccgtgggcaaggcctggggctccaactgtgag
aggtgtccccaagacggcacggcctccttcagtaagatttgtccagcagggaagggctac
ttcctccatagtgtccgggagacggtggcgttcccacctcagatccactccagcctggag
caggtccccctcaagcctgacaagaagaaagacaaagtcaagcacccggaggagcctcca
gagacaaccacacccatgcagctgtctcccatcagcacccatggcccccgtgtacctgtg
atcatcaccaagcccacccctccgcccatcatcaggttgaacccaggcagtgaccccctg
gaggtggcacagacgcaggtctcaccagagacagatgagtgcaggctgaacaggaacctc
tgtggccatggggagtgtgtcaacgtgcacactggctacaaatgtgagtgttatgctggc
taccggctccaccctcagaggaacgcctgtgtggatgatgatgaatgtgacgctgagcca
tgtggccacagcagaggaatctgcatcaacacagaaggctcctaccgctgccgctgtctc
catggctacaagctcctggtgtaccatgggaagctcaggtgtatagatgcgaatgagtgc
tccaagccggacatctgtgggcaggggggtcagtgtgttaatctgccagggtcctacaag
tgtgagtgtcacaaaggcttcaggagcaagtcacaacgccagccagcatgtgaagatata
aatgagtgtctggaccccaacagttgtcccaatgaccagtgtgagaacacaccaggctcc
tacgagtgtgttccctgcttacctggtcaccaggcccagggtggggtctgctacgatgtc
aatgagtgccagaagcgcggtgtgtgtcccaacgggcgctgtgagaacctcccaggaacc
taccgctgcctctgtaacgagggcttcctcccagcagcagacagcaaaggctgcagagac
attgacgagtgtgaggatgacagactgtgtgccaacgggcgctgtgtcaacacggaaggc
tccttccagtgccagtgctacccaggataccagcgtactcaggagggcagccattgtgaa
gatataaatgaatgtgagcgtccctctaactgccagagggggcgctgtatcaacagcatg
ggatcctaccgctgtgaatgtcagaagggttacatgctggtcggaggtcggaggtgccaa
gacatagatgagtgtgcgacagacaggggtctgtgtcagccgcatggtgtgtgtgagaac
agacagggctcctatgtgtgtgtgtgcaaagacggcttcatcctgtctgaggacaagcac
agctgtgaggagattgaggtggccgtggaagataagaaggagtgttacctgaacctggat
gacacagtgttctgtgacagtgtcctggccaccaacgttaccaagcaggagtgctgctgc
tccatcggcgtgggctggggagaccactgtgagatctacccctgccctgtctaccactca
tctgagttccactccctgtgtccagtgggccgaggtttctaccatgaggagggagtgact
gagtacggcctgtctgtccatagagatatcgatgagtgtgtgctgttctccaatgagatc
tgtaaggagggccgctgtatgaacacacagcctggctatgaatgttactgccaacagggc
ttctactacgacagcaacctactggagtgcatcgatgtgaatgagtgccacgacgagtct
ctgtgtaccaacggtcagtgtaagaacaccagaggctcctactactgcacctgtaagtcc
ccctggatctatgaagcctccaataagaagtgtatcatccccactgtggcaggtgtggat
gagtgccaggactcattgaactgtaagaatggccactgtgtggacacccctgggtcctac
tactgcatctgctctcccccctggatcctggccacggaccgcaacagctgtgtgacccca
gaggagcaggctgatatcaatgagtgccaggacccctcgtactgtaagaatgggaggtgt
gtgaacacgcccggctcctttcactgtatatgtacccagcccctcaccttcagcgcagcg
ctcaaacagtgtgtctatgacgaccgcacagcggcccataaggacgtgtgtttcctgcag
gtggatgaggacctgatctgcagccaacccaggaacggtttggttgtcacctactctgag
tgctgctgtcactatggccgtggctggggccctgagtgtaggacctgtccccagagaaac
tccgggatctttaaccggctgtgtgagatgcacttggagacagagtctgatggtgaggga
gatttcctggcagctttcgccaactacaacccagaaggggacagctcagaagaggactca
gatgagtgtagttgtgccaatggtcgctgtgtgcgttcctacctgggcactatgtgtgag
tgtaacacaggttttagactggaccactcccgcacccgctgcacagatattgatgagtgt
gctgaaccaggggtccgagttaatccatgcaagaatgcccggtgcgtcaacaccataggc
tcgttcaagtgctactgcaaaaatggctttgtccctgcacgaaggcccaacatatgtgta
ccaggcacgaaggcccaacatacccgtaccagggctctataa
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