Salvelinus namaycush (lake trout): 120057303
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Entry
120057303 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120057303
04121 Ubiquitin system [BR:
snh04121
]
120057303
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120057303
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120057303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
BTB_KLHL33
zf-C2HC_2
zf-C2H2_15
zf-C2H2_2
zf-Di19
Zf-C2H2_ZNF451_2nd
zf-met
HNH_5
zf-C2H2_jaz
BolA
zf-C2H2_11
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
120057303
NCBI-ProteinID:
XP_038861801
UniProt:
A0A8U1BQK3
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All DBs
Position
Sna12:44416482..44449464
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AA seq
684 aa
AA seq
DB search
MTERIHNINLHNFSNSVLGTLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEVPSVVSVQSIQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGLAGPGGFPVNPGDSGQETPRGTPESGTSGPSSDAESVYMQATSQQSLERAYTSHY
SYSGLSLQNGTRERSHYVTSMTTSYDPALGTQKDQHDQDPPWITRIHERSQQMERFLSTP
ETTHCRKQPRPVRIQTGGVHIKQEAEDEYSSYGMDECTGDTDHVEGVESEPKGESFDSGV
SSSIGTEPDSVDQQQYLLGFGREGVGEGQQCEGTPVQIDVNDSSPEQMHETEDRGTSHGT
SDSNMLQPLPNPIMAQSLPSAPLYMRQAESLTSNLRMPLTMTSNTQVMGTASNSYLPNLF
ATQSASNNKPFLFSLPQSTGGQQPQFVAVPPPSMPPFSQQLMVQQQAAREQQQAAQMGQG
EKKPYECTLCTKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRA
YQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSTGGAVTGL
SGAAGAGGPVSIPMAVPEPGAGVVALAMPVSGGAGIGGGVGTGVGVAAEASCQEGTTYVC
SVCPAKFDQIEHFNDHMRMHVSDG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcgcattcataacatcaatctccacaacttcagcaattctgtacttgggacc
ctcaatgagcagcgcaaccgtgggcacttctgtgacgtgactgttcggatccatggaagc
atgctgcgagcccaccgctgcgtgctggccgctgggagccccttctttcaggacaagctg
ctcctgggctacagtgacattgaggtcccctcggtggtctcggtgcagtccatccagaag
ctgatagacttcatgtacagcggggtcctgcgggtttcccaatcggaagctctccagatc
ctcactgctgccagcatcctgcagatcaaaacggtcatcgatgagtgcacccgcatcgtg
tcccagaatgtgggcctggccgggccaggggggttccctgtcaacccaggggactctggg
caggagacgccccggggcacaccggagtcaggcacctctgggcccagcagcgatgcagag
tcagtgtacatgcaggccacgtcccagcagagcctagagcgtgcgtacacatcgcattat
tcctactccggcctttcactgcagaatggaacccgtgagcgctcccactacgtaaccagt
atgacaacaagctacgacccagccctcggcacgcagaaggaccagcatgaccaggacccg
ccgtggatcacccgcatccatgagagatcacagcagatggaacgctttctatccactcct
gagaccacccactgccgcaagcagccccgaccggtacgcatacagacaggaggcgttcac
ataaagcaggaggcagaggacgagtacagcagctatggtatggatgagtgcacaggagac
acagaccacgttgagggtgtggagagtgagccgaagggtgaaagctttgactcaggggta
agctcctccatcggtactgagccagactccgtggatcagcagcagtacctgcttggcttt
gggagggaaggggttggagaggggcaacagtgtgaggggaccccagtgcagatcgatgtc
aatgactcctccccagagcagatgcatgagacggaggacaggggcacatcccacggcact
agcgacagtaatatgttgcagcccctgcccaacccaatcatggcccagtccctgccaagt
gccccactctatatgcgtcaggccgaatcccttaccagcaacctgaggatgccgctcacc
atgaccagcaacacccaggtaatgggcacggccagcaactcctacctgcccaacctcttt
gccacacagtcggccagcaacaacaaacccttcctcttcagcctgccacagtccacggga
ggccaacagccccagtttgtggccgtgccgccccctagtatgcccccattctctcagcag
ttaatggtacagcagcaggcagcgcgggaacagcaacaggcggcccagatgggacagggg
gagaagaagccctatgagtgcactctatgcactaaaacctttactgctaaacagaactat
gtcaaacacatgtttgtgcacactggtgagaaaccacatcagtgcagcatctgctggcgc
tcgttctccctgaaggattacctaatcaaacacatggtcacacacacaggggtgcgtgcc
taccagtgcagcatctgcaacaaacgcttcacccaaaagagctccctcaacgtccacatg
cggctgcaccgtggagagaagtcctatgagtgctacatctgcaagaagaagttctctcac
aagaccctgctggagagacacatggctctgcacagcacagggggcgccgtcacagggctg
tccggggcagcaggcgccggtggccccgtctccattcccatggccgtgcccgaacccggc
gctggagtggtggccctcgccatgcccgtcagcggaggcgccggaatagggggtggggtc
ggaacaggagtgggtgtggctgcggaggcaagctgccaagaagggaccacctatgtgtgc
tccgtctgccctgccaagttcgaccaaattgagcacttcaatgaccacatgcgaatgcac
gtctctgatggataa
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