Salvelinus namaycush (lake trout): 120057398
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Entry
120057398 CDS
T07522
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120057398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120057398
03036 Chromosome and associated proteins [BR:
snh03036
]
120057398
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120057398
Coactivators
SAGA/TFTC/STAGA complex
120057398
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120057398
STAGA complex
120057398
TFTC complex
120057398
SAGA complex
120057398
SLIK complex
120057398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
TFIID-31kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
120057398
NCBI-ProteinID:
XP_038861935
UniProt:
A0A8U1BQU1
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All DBs
Position
Sna12:complement(50907921..50958903)
Genome browser
AA seq
632 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRCKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEENEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKTESTEPLKAVKPGQEEEGSIQK
GQGATSAEAKGKKDGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKAVSDGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNVEQYRADYGYLGPMLCSHVVKARAQAALQAQQVNRTTLTITQPRT
TLTVSQSGIGGSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSSGASSTQ
QVITRTSSSVTSTVASATSTLQPLVKLESGGAGGLGGSRPLQKYIVVSLPSSSSLESKSG
VLPPSSASPILLEAGMKMDCSDSPGASTQSPH
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcggaggccgaagcagtgcactgtggttctgcccacggagtcaatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctaagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagtttatgcaccac
ggaaagagatgtaaactgacgaccagcgacatagatcacgctcttaaactgaagaatgta
gagcctctctatggcttccagtcgcaggaattcatcccgttccgcttcgccagtggagga
gggagagagcttcacttctacgaggagaatgaggtggacctcagtgacatcatcaacaca
cccctccctagagtcccccttgacgtttctctcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagagaacccacccccagcccccaaagagcagcagaagactgaa
tctacagagcctctcaaagcggtcaagcctggtcaggaggaggagggctccatccagaag
ggccagggagctacatctgcagaggctaaaggtaagaaggatggtctgatgaggatgaag
cctcgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacggag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtatcgccacagac
cccgggctctaccagatgcttcccagattcagcacttttatttctgaaggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccacgctctacctagagaaatatctgcacgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgacaagactcag
tggacgacacgctacggctgtatcgctggactgtctgaactaggacctgacgtgatcaag
acgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagcagtgtctgatgga
cctgttgtctccaacattgataagataggagcagaccacgtccaaagccttttactgaaa
cactgtgccagcgtcatcgctaaaacccgtcccctgcctgacaacgtggagcagtaccgg
gcagactacggttaccttgggcccatgctgtgttctcatgtggtcaaggccagggcccag
gcagcactacaggcccagcaggtcaacagaaccacacttaccatcacacagcctcggacc
accctaactgtgtctcagagcggaataggagggtcaggggggtcccgtacccccagcatc
atcaaggtacccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgcccccggcaaccaagtacatcgtcatggcaaccagctcaggggcatcttccacccag
caggtgatcactcggacttcctcctcagtgaccagcacggtcgccagcgctacctccacg
ctgcagcctctggtcaagctggagtctggaggggccggcggcctgggggggtcgcgaccc
ctccagaagtacattgtggtgtccctcccctcgtcctcctctctggaaagtaagagtggc
gtgctccctccctcttccgcctcccccatcttgctggaagccgggatgaagatggattgc
tcagactcccccggcgccagcacacagtccccgcactga
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