Salvelinus namaycush (lake trout): 120057416
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Entry
120057416 CDS
T07522
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120057416 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120057416 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120057416 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120057416 (vtnb)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120057416 (vtnb)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120057416 (vtnb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
120057416
NCBI-ProteinID:
XP_038861967
UniProt:
A0A8U1BY62
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Position
Sna12:52769162..52787691
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AA seq
468 aa
AA seq
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MKLAVVLLALTLASAFAAEESCVGRCHSFNPMTKCQCDSMCRYYSSCCMDFDSACPRKIA
RGDTFDAPEDDVANTPTTAVNTNPGTMVDPETTNIPPVMNTTAIPPTTLAPTTTIHTPTL
PPDPEAVPCSGKPFDAFLQLKNGSIYAFRGDYFFELDERAVVPGHPKLIYDKWGIRGPID
AAFTRINCQGKTYIFKGNKYWRFEDDVLDADYPRDISVGFEKVPTDVDAAFAIPAPGHHG
KEKVYFFKGDQYYQYEFKHQPSHEECVRLTKSSPSVLFTRYTNLYCDDTWENLFTVLFQG
LHGHKKGPRFINKDWVGIKSPIDAAMVGRLYISPKPTPSPSPTPRRRANRWRKDRRRGQR
GRARQSRSAYLEDFFLEDDWMGGGFTYDYDYSDYTPTQTTHDKTLPVQNVYFFKKDKYYR
VDLQTKRIDFASPPYPRSIAKYWLGCKQESGPGREEIDRHYEPMAEKR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggcagttgttctgctggcactcacgctggcctctgcgttcgctgcagaagag
tcgtgtgtgggtcgctgtcacagcttcaaccccatgaccaagtgccagtgtgactctatg
tgtcgctactacagcagctgctgcatggactttgacagtgcctgccctaggaagattgcc
cgtggtgacacatttgatgccccagaggacgatgtagcgaacacccccactacagcagtt
aacaccaaccctgggaccatggttgacccagagaccacaaacattcccccagttatgaac
acaactgctatcccccccaccaccctggccccgaccaccaccatccacacccccaccctc
ccccctgacccagaggcagtgccctgcagcgggaagccctttgacgccttcctccagctc
aagaacggttccatctacgccttcagaggtgattatttcttcgagctcgatgagagggcg
gttgtccccggtcaccccaaactgatctacgacaagtggggcatcagaggacctatagat
gctgcctttactcgtatcaactgccagggcaagacctacatcttcaagggaaataagtat
tggcgttttgaggacgatgttctggatgccgattaccctcgggacatctctgtagggttt
gagaaggttccaactgacgtcgatgctgccttcgccataccagcacccggtcaccatggc
aaagagaaggtctacttcttcaaaggggaccagtactaccagtatgagtttaagcaccag
ccgtctcacgaagagtgtgtgcgcttgactaagtcgtccccctctgtgctcttcacgcgc
tacaccaacctgtactgtgacgatacctgggagaacttgttcacagtgcttttccaaggc
ctgcatggccacaaaaagggcccacggttcatcaataaagactgggtggggatcaagtcc
cctatagacgctgccatggtgggccgtctttacatcagccctaagccaactccctcccca
tcccccacccccaggagacgagccaataggtggaggaaggacaggaggcggggtcagaga
ggcagggccagacagagtcgctcagcgtacttggaggatttctttttagaagacgactgg
atgggaggaggcttcacctatgactatgactacagtgactacacccccacacagactaca
cacgacaagacactgcctgtacagaacgtctacttcttcaagaaagataaatactacagg
gtggatctccagaccaaacgcattgactttgccagccctccctacccacgatccattgcc
aagtactggctgggctgcaaacaggagtctggcccgggcagagaagagatagacagacat
tacgagccaatggcagaaaagagatga
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