Salvelinus namaycush (lake trout): 120057428
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Entry
120057428 CDS
T07522
Name
(RefSeq) protein turtle homolog B-like
KO
K22656
immunoglobulin superfamily member 9B
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120057428
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
IGSF9
120057428
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Pur_ac_phosph_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
120057428
NCBI-ProteinID:
XP_038861981
UniProt:
A0A8U1BQX2
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Position
Sna12:19883197..20118957
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AA seq
1635 aa
AA seq
DB search
MDDSSDGTGGDDESHGPGWSVVKSKIKKNGPAISAADSSGRSSVETVKRVKVVKGPAISA
ADSSGRSSVETVKRVKVVKGPAISAADSSGSSSVETVKRVKVVKGPAISAADSSGSSSVE
TVKRVKVVKGPAISAADSSGSSSVETVKRVKVVKGPAISAADSSGSSSVETVKRVKVVKG
PAISAADSSGSSSVETVKRVKVVKNKSAHGVREEPQFVTTRAGENVILGCDVAHPLNGQP
YVVEWFKFGVPIPFFINFRFHPPHVDPEYAGRASLHGKSSLRIENVRSDDQGWYECKVLM
LEQQYNTFHNGSWVHLTVNAPPNFTDTPPLYVEAKEGGSITLSCVASGNPKPSINWLREG
EPVEDSIKYKVSDGSLTVLLVRREDRGAYTCRAYSIQGEVVHTTRLLVQGPPFIVSPPQN
LTVNISQAAKLDCLAEAYPGNLTYTWFWEDDNVFFKNGLRDRVSILVDGSLIIGSVKPED
AGRFTCSPSNSLGRPPSASAQLTVQYPARVKDMPPAIYVAIGLPGFIRCPVDANPPATLV
KWTKDSNPLRIEKYPGWSQMEDGSIRVTEVTDDSLGTYTCMPYNALGSEGWSDPTPLVLK
DPPKFSIVPGGEYRQEAGRELVIPCAAEGEFPYPNITWRKVWKPSKSKHNVLPSGSLQFK
SLSKEDHGEWECVATNVATSITASTHLLVIGTSPHAPADIHAAVSTTWANVSWEAGYDGG
FEQTLSVWVKREQLGPHDWLSIAVPSGQTWLVVPGLEPQTAYQFSVLAHNKLGTGPFSEV
VTVNTLVFPISTPEPLVLLTPPRCLIANRTQQGVLLMWIPPANHTAPIERYVMEFRLGER
WDVLDDAIPAGETELLARDLIQEAWYEFRVIAVMEELVSEPSNTVGVSSTDFFPPPEMVD
EGGLARPVVAGIVATICFLAAAVLFSTLAACFVNKQRRRKLKRRRDPPLSITHCRKSVET
PFSSGKVSPESMRSMGQPSECSEDGHGMSMKKIPPSPAKKEELSLYKKTKRAITSKKYSV
SKYEMEATTPIELISRGPDGRFVMDPSDMEMISVNPRRIEGFPFVEESDRYPEFRQSDEE
NDDPGPIPPVMATLRPHQISPISSQESYLQPPAYSPRFQRPMEGMTIMESSRLEATGQIQ
GSLHHRAFPHSHGHFYGYLGSPGEPDPPPPFYMVDTSPLSSVMSSPPYHPEGPFGHHRIP
EEMGEGDIHHYAVSSFPLPLTLTSSSRSPEIWHRPDFPFASLERPHFIFPPHHPLHLHRE
PFFPPPHVLPLGALQPSSLQVPSYPGVLQLEAPKSCPGKSPSKVKPQGLPVKRLAMQEAQ
SLGKLRHKSHGMGVPVLPYPDPTVLMGSPSTFSRLDTRWFEPTPRLSPRQARRMEPSMMV
LQPSRLSPLTQSPLSSHEGSPEILVRPRPRPSFVQPSIPPEMSEITLLPPSSASFSRRSS
LSSSPAHGQVSKRASPSFRSHMAFATSATSYPSQSPSPPMESSNMFGQIPSDPIGQIPSQ
RRTEEEVLPSEPSPPQLSASGNRRGEPGAPAGSERFDALRYQRIKKAKKMMVVNNNNSKS
RRKTGESSGVTQQDYTSQVLQPEEALYLRKKKKRPVRQDPYARFSALLYRRPPREDRKAI
LASMDNMDPDHATLL
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagttctgatggtacgggtggggatgatgaaagtcatggacctggatggtct
gtggtgaaaagtaaaataaaaaagaatggccctgctataagcgccgcagacagcagtggc
cgttctagtgttgagaccgtgaagagggtgaaggtagtgaaaggccctgctataagcgcc
gcagacagcagtggccgttctagtgttgagaccgtgaagagggtgaaggtagtgaaaggc
cctgctataagcgctgcagacagcagtggcagttctagtgttgagaccgtgaagagggtg
aaggtagtgaaaggccctgctataagcgctgcagacagcagtggcagttctagtgttgag
accgtgaagagggtgaaggtagtgaaaggccctgctataagcgctgcagacagcagtggc
agttctagtgttgagaccgtgaagagggtgaaggtagtgaaaggccctgctataagcgct
gcagacagcagtggcagttctagtgttgagaccgtgaagagggtgaaggtagtgaaaggc
cctgctataagcgctgcagacagcagtggcagttctagtgttgagaccgtgaagagggtg
aaggtagtgaaaaacaaaagtgcccacggcgtgcgagaggagccccagtttgtgacaacg
cgcgctggagagaacgtcatcctgggatgcgacgtggcccaccccctgaacggccagccc
tatgtggtggaatggttcaagttcggagtgcccatccccttcttcatcaacttccgcttc
cacccgcctcatgtggacccggagtacgccggccgagccagtctgcacggcaaatcttct
ctgcggattgagaatgtgcgctcagacgaccagggctggtatgagtgtaaggtcctgatg
ttggagcagcagtacaacacctttcacaacggcagctgggtgcacctcacagtaaatgct
ccccccaatttcacggacacgccaccactgtacgttgaggccaaggaaggcggcagcatc
accctgagctgcgttgcttccggcaaccccaagccctccatcaactggctccgggagggc
gagcccgtggaggacagcatcaagtacaaggtgtctgatgggagtctgacggtgctgttg
gtcaggcgcgaggacagaggggcgtacacctgccgagcctacagcatccagggggaggtt
gtccacaccacacgcctgcttgtccaagggccaccgttcatcgtgtcccctccccagaac
ctgacggtgaacatatcccaggccgccaagctggactgcctggccgaggcctaccctggc
aacctcacctacacctggttctgggaggacgacaacgtctttttcaagaatggcctgagg
gacagggtcagtattctggtggacggctcgctcatcattggcagtgtgaagccagaggat
gctgggagattcacctgcagccccagcaacagcctgggccggcccccatccgcctcggcc
cagctcacagtgcaataccctgcccgtgtcaaagacatgccacctgccatctacgtggcc
atcggcctgccaggcttcatccgctgcccggtggacgccaacccacccgccacgctggtc
aagtggaccaaagatagcaaccctctccggatagagaagtacccaggttggagccaaatg
gaggatgggagcatccgcgtgactgaagtgacggatgactctctgggcacctacacctgc
atgccttacaacgccctgggctctgagggttggtccgatcccactcccctggtgctaaag
gatccccccaagttctcgattgttcccggaggggagtacaggcaggaggctgggagagaa
ctggtcatcccctgtgcggctgagggagaatttccctatcccaacatcacatggaggaag
gtatggaagcccagcaaaagcaagcacaatgtcctcccctcaggcagcttacagttcaag
tccctaagcaaggaggaccacggggagtgggagtgtgtggccaccaacgtcgccacgagc
atcactgccagcacacacctcctagttattggcacaagcccccacgccccggccgacatc
catgcggcggtctccaccacctgggccaacgtgtcatgggaggctggctacgacggcggc
tttgagcagacattatcagtctgggtgaagagggagcagctgggcccacatgattggctg
tctatagccgtgccttctggccagacatggctggtagtgcccggcctggagccccagacg
gcctaccagttcagtgtccttgcgcataacaagctgggtacgggccccttcagcgaggtt
gttactgtgaacacactagtttttcctataagtacccctgaaccactggtgctgcttacc
ccaccacgatgcctcatagccaatcggacgcagcagggcgtcttgctcatgtggatcccg
ccagccaaccacacggctccgatcgagcgctacgtcatggagttccgcctaggggagagg
tgggatgtcctggatgatgccatccccgctggagagacagagctgctagccagagatctc
attcaggaggcgtggtatgagttccgggtcatagcagtcatggaggaactggtcagcgag
cccagtaacacagtaggagtgtccagtacagacttcttcccacccccggaaatggtggat
gagggggggctggcgcggccggtggtggctggcatcgtggctaccatctgtttcctggca
gctgctgtcctctttagcacactggcagcctgcttcgtcaacaagcagcgccgacgaaag
ctcaagaggaggagagacccccctctctcgataacacactgcagaaaaagtgtggaaact
ccgttctcctctggtaaggtgagtccggagagcatgcgttccatgggacaaccatcagag
tgttctgaggacgggcatggcatgagcatgaagaagatccccccgagtcctgcgaagaag
gaagaactctccctgtacaagaaaaccaagcgagcaataacgagcaaaaagtacagcgtc
tccaagtatgaaatggaggcaaccacgcccatcgagctgatcagccgaggccctgacgga
cgcttcgtcatggaccccagcgacatggagatgatttccgtcaatccccggcgaattgag
ggctttcccttcgtcgaagagtcagaccgctatcccgaattccgccagtcggatgaggag
aacgatgatcccgggcccataccccccgtcatggcaacccttcgacctcaccaaatctcc
cccatctccagccaggagtcttacctgcagccaccagcctacagcccccgctttcagagg
cccatggaaggtatgaccatcatggagagcagtcggctcgaggccacggggcagatccaa
ggctccctgcaccacagagccttcccccacagccacggtcacttctacgggtaccttggc
agccctggggaacccgaccctccaccccctttctacatggtagacaccagccctctgagc
tctgtcatgtcgtcaccaccttaccatcccgaagggccctttggtcaccaccgcatccct
gaggagatgggggaaggagatattcatcactatgccgtctcaagcttcccccttcccctg
acgcttacctcttcctctcgctccccggagatctggcacagacccgatttcccctttgca
agtctggaaaggccccacttcattttcccaccccaccaccctttgcatctccaccgggaa
cctttctttcctcctccccatgttcttccccttggtgctctccagccatcctctctccag
gtgccctcctaccccggtgttctgcagctggaggccccaaagagctgtccaggcaagtct
cccagcaaggtcaagcctcagggccttccagtcaagcgtttagctatgcaagaggcacag
agtctagggaagttaagacacaaaagccacggtatgggtgtgccagttttgccttacccc
gacccaacagtcctcatgggcagccctagcacattcagtagactggacacccggtggttc
gagcccaccccccggctcagccccaggcaggctcgtaggatggagcctagcatgatggtc
ctccaaccttcccgcctctcgcccctcacccagagtccacttagttcccacgagggctcc
ccagagattctagtgcgaccgcgtccccgtcccagcttcgtccagccctccatacctcca
gagatgtccgagatcaccctgcttccaccctcttcagccagcttctcccggaggtcgtct
ctctcttcctctcccgcccatggtcaggttagcaagagggcaagtcccagcttccgctcc
cacatggcctttgccacctccgccacaagctacccgtcccagtccccgtcaccccccatg
gaaagcagcaacatgtttgggcagatcccaagtgatcccattgggcagataccatcccag
aggagaactgaggaggaggtccttccgtccgagccctctccaccccagttgtcagcttca
ggaaatcgtcgaggtgagccgggtgcccctgcggggtctgagaggtttgatgcattgaga
taccaacgtattaaaaaggccaagaagatgatggtggtcaacaacaacaactccaagtcc
agaagaaaaacaggtgagtcctctggcgttacccagcaggactacacctctcaggtactc
cagcccgaagaagctctctacctccgcaagaagaagaaacggccagtcagacaggacccg
tatgcccgcttctccgctctgctgtaccgccgcccgccccgggaggaccggaaggccatt
ttggccagcatggataacatggacccagaccatgccactctcctctga
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integrated database retrieval system