Salvelinus namaycush (lake trout): 120057461
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Entry
120057461 CDS
T07522
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120057461 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120057461 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120057461 (sptbn4a)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120057461 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
120057461 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
120057461
NCBI-ProteinID:
XP_038862002
UniProt:
A0A8U1ETQ6
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Position
Sna12:30512114..30539256
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AA seq
1368 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGNLYKDVGELGSLQGVCLPQRGSLVKGGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRQARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQVWEVLRLEAERRSVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLINEEKGTDEESTLQLLKEHLALEATLENYAETVGML
SQQCQRQLELGHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEHVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQTAGKMRQLPEV
RACQASIANPATLQRLMLSFEHALQLLVSQVRQLQENAAQLRTIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREQLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRRKTIQQCVELGKILLAAGNPASEEIKEKLDALLAKQKDLSERWDKQQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLISSRDAQAQTDEVEQLILRHEAFRNAAATWK
ERFSSLRQLSNAEKLREEQSSKPSPMPLSSRRMFPSSCLTPTVPLATSTLLRQTVQVHIE
PRPKQTSLEMSASASSAAQRLGSTIASYAPVINGSGYHGLDHQSISGGLESSNYPGLNHP
GGGGVDSSSSYLGGNHQTGPPPVDSSGYLGLNHQSSGGMHLKADCMQPRINHMQKAVNPL
LEASRAQREQFGDIPMVDMIGPESGLDLLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQ
TSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKARTPRQDDSSDMESAKEGSD
KRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPVTYERPRARDRPKPRRRPRP
KEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGHQKSPSSKSWVNLYCVLSK
GGITFYKDAKSTTTPYNEETPLDLSVCICDSTIGYKKKKNVFVIKKNDGNDYIFHAKDEE
DLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSEGDADARSERSEMGGEVEE
EERSEKERSEKGEGSKKTGEGSEKADTSETGERAEGGAGGSSTSGKSK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcacaggaag
tggctgaagcaccaggccttcatggccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggccaggagctgatcgatgagaagcctgagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagcccccccagctggagcaggctcatcaccta
cccacattcaacgagcagctgcataaatttcagtctcagatggggaacttgtacaaggac
gttggggaactagggtccctccagggggtgtgcctcccccagcgaggcagcctggtgaag
ggtggggagggagaagggggcgagcagccagccgtagtagagacccgcatcgtgcgcctc
atcgagcccctgaaggagaggcgacgcatcctgctggcctccaaagagatgcaccaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcctcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacactg
cagagggatctgcaggggcgccaagcacgggtggaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccctgaggttgactttgtgcgtgagggggcggggcatgtgcgt
caggtgtgggaggtgctgaggctggaggcggagaggaggtctgtgatgctggatgtggtg
ctgcaggcccagcagtactacagcgaggcagccaaggtggagtcctggctggcaggccag
aaactgcacctcatcaatgaggagaagggcacggacgaggagagcaccctgcagctgctg
aaggagcacctggccttggaggcgacactggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagcgacagctggagcttgggcacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtatgtgtctctgaaggacatggtggagcacaggaag
accaagctggagcagcagtactggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagagggaggccgttgccagctccactgagctgggtcaagacctggag
catgtcacgatgctacaggaaaaattcaccaagttctgctcagagaccaacagcataggc
cagcagaggatggagcaggtgaataagatggtgaatgagatgatagactgtggccacacg
gacgcggccaccatagctgagtggaaggacggactgaacgagtcatgggccgacctactg
gagctcatggagacccgaagacagatgctggcagcatcacaccagctgcacaagttcttc
accgactgcaaagaggtcttggctcagactgcggggaagatgaggcagttgccagaggtg
agggcgtgccaagccagcatcgccaaccctgccaccctgcagaggctcatgctctccttc
gagcacgccctccagctgctcgtctcacaggtaaggcagctgcaggaaaatgcggcccag
ctgaggaccatctatgccggagagaaggctgaggccatcatgagcaaagagcaggaagtg
atgtcagcatggaaggagttactggtttcctgtgaggccagtcgtgtgcaggtcacctcg
gtgacagacaaggtgcagttcttctcggtggtgcgcgagcagctcatgtggatggagggc
atcatggggcagattggaggggacgaccccagggactcgtcttctgcagaggtgatgatg
aaacagcatggtgagctgaaagccaagatggatggccgtaggaagacaatacagcaatgt
gtggagctgggaaagatcctgctggccgcaggcaacccagcctctgaggagataaaggag
aagttggatgcgctcctggctaagcagaaggatctctctgagagatgggacaaacagcag
gagaagctgcagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcggag
gcctggctgaaggccaaggagcccctgattagctccagagatgcccaggcccagactgat
gaggtggagcaactcatcctccgccacgaggccttccgcaatgctgcagccacctggaag
gagcgcttcagctcactgagacagctctccaatgcagagaagctgagagaagaacagagc
agcaagccttccccaatgccactctccagtcggaggatgttcccatcatcctgtctcact
ccgaccgttcctcttgctacctcaactctgctgagacagacggtccaggtgcatattgag
cccaggcccaagcagaccagtctggagatgtctgcctctgcctcctctgcagcccaaagg
ttgggttctaccatagccagctacgctcctgtcataaatggctctggttaccatggactg
gaccatcagagcatcagcgggggattggagagttccaactaccctggactgaaccatccg
ggcggtggaggagtggacagcagctctagttaccttggagggaaccatcagactggcccc
ccgccagtggatagttctggctaccttggactgaaccatcaaagcagtgggggtatgcat
ctgaaagctgactgcatgcagcccaggatcaaccacatgcaaaaagctgtcaaccccctc
ctggaggccagcagggcgcagagggaacagtttggggacatccccatggtggacatgatc
gggccagagtctggcctggatctcctccacggcaggctccagagggacccccgcggcagc
cgctcagacccccagatggaccacctgcggcgggagagggagtacaagctaggtcggcag
acctccagcgaacaggagattcaggcgcggctcaacgagctgccaatgattgtgcgccag
gagcgctataggcgacgcctggagaggcagtcgtccagcgagcaggagggcagtgggaag
gcgaggacaccgaggcaggacgactccagcgacatggagtcagccaaggaaggctccgac
aagcgctcaacagagaagagagccaccaccatggctgagattgtggagcaggcccaggag
agagaggcagcacaagctcgaggggagacgtaccgccccaccagcagcctctcagcacct
gtgacctacgagcgcccgcgcgcccgagaccgccccaaaccccgcaggagaccccgtccc
aaagagcctgaggagaagcgacgctctcgctcggctccggcccagagtccggcacaactt
ctgccgccctcacacactgcccataacgaaggcttcctgtaccgcaaacacgactttgag
ggccaccagaagagtcccagcagtaagtcctgggtgaatttgtattgcgtgttgtcaaag
ggagggatcactttctacaaggacgccaagagcaccaccacaccttacaatgaagaaacc
ccactcgacctgagcgtctgtatatgtgatagcaccataggatacaagaagaagaaaaat
gtcttcgttatcaagaaaaatgatggcaatgactatattttccatgcaaaggatgaggag
gacctgaaggcttgggtcactaacatcaccaccagtataactgaacacgaggagattgcc
aagtgggacaagcccaccacctcgtccacagatcccgaccgctcggagaggaaggagaag
tctgagggcgacgcagacgccaggtcagagaggtctgagatgggaggagaggtggaggag
gaggagaggtcagagaaagagaggtctgagaagggagaggggtccaagaagacgggagaa
ggctcagagaaagcagacacgtcggagacgggtgagagggcagagggaggggcagggggc
tccagcacgtcagggaagagcaaatga
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