Salvelinus namaycush (lake trout): 120057492
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Entry
120057492 CDS
T07522
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120057492 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120057492 (arap1a)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120057492 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
120057492 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120057492 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
PH_6
PH_3
PH_8
RA
PH_13
RNR_Alpha
Ras_bdg_2
NICE-1
Motif
Other DBs
NCBI-GeneID:
120057492
NCBI-ProteinID:
XP_038862021
UniProt:
A0A8U1EV27
LinkDB
All DBs
Position
Sna12:33755870..33767523
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AA seq
1107 aa
AA seq
DB search
MQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSRSVNPEDSDFHHSPVIKMGWL
HKTPPQGTLVFQKRWVMLDAQYLRYFQNEKGVYSKRIIAILSVTEVLNVGGQKFEVVTRN
RTFLFRAENNTVREEWVSVLKETIQQRCNSMEMSLMNFSDTSGQRASRVSLISKQGYLEM
SGLRSKLYVVICANSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTTFYRTFSF
VAESEQQREQWVEALQACVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWASVNLCVVL
CKCCAGVHRGLGQSVSKVRSLKMDEKVWTENQLFLLLGNDKVNLFWAANIPPSEMLCPSS
DSEERQRFVTAKYCQGKYRRYHALFGQQEALNKALCNTIQTGDVLETLSLVFCGADVNCY
TGDPELPSPVSIAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAALPISHTGYLFKTA
SSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVNPQGKHGY
GHSFELYHDSGRVYLFGEDSPDTVREWIKAIGKALVPPVAEDLVGWSFERVGRLRYTAGQ
SFHCPCLGWFSLGGSRLLLLLHGEDHADNIDLRKLQELSVEQEAAAVVLVDRGRRLRLEG
DRRPDFQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDCCISYITQHGLKSEGIYRRSG
VNSKIAALLFSLRHDPRQVRLSEGERQVDNVANVLKRFLREVGEGVFNGHQASLPWLHTT
TVSERRERVSQYKALLHSLPLVNRATLGAVINHLYCVQCFADENQMNMHNLAIVFGPTLF
QTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQKQLDMISHVIKAQEEHTEEGTPSPLTIC
GVYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPTQQGEYWSCFLVNDNQEMERPLH
YQERALAIYFSLGKDCHLVVRRNCYMDAMLIYIAGMVDVSRNSMIKFRDEKGQRGKRTFS
RRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVCEQAERDK
QQWYLCCESKNELIEWLATFMNLQWLI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactgtttccacagtcagtttagtgtggatgaggctgagtacgaggacattgag
gaaaacaggagaacatctgttgatgaagacagtatctatcttggctgcacactgtcacga
tcagtcaaccctgaagactctgattttcaccactctcctgttatcaagatgggctggctg
cacaagaccccgcctcaggggacccttgttttccagaagcgttgggtgatgttggatgca
cagtatcttcgatactttcaaaatgagaagggggtctactcaaagcggatcatagccata
ctgtctgtcactgaagtgcttaatgttggagggcagaagtttgaggtggtgacaaggaac
aggacattcttgttccgtgctgagaacaacaccgtcagggaggaatgggtgtcagtactg
aaagagactattcagcagcgttgtaacagcatggagatgtcccttatgaacttcagtgat
acgagtggacagcgtgctagcagagtctcactcattagtaagcaaggatacctggagatg
agtggactgcgctccaagctctatgtagtcatctgtgccaacagtgtcttcctctatagg
aacgctgaggagcacagccagggtgttggcatcacctccattgagatgaatttgggtact
gtgaagggcacagacaaacggtccttcaacctcaccaccttctacaggacattcagtttt
gtggccgagtcggagcagcagcgggagcagtgggttgaggccctgcaggcctgtgtcagt
cactctctgtccagcaacgcggtggcccagaagatctggtcggaggaggccaaccagcgc
tgtgcagattgtggcgccccccacccagactgggcctctgtcaacctgtgtgtggtcctc
tgcaaatgctgtgcaggggtgcacaggggtctgggtcagagtgtgtccaaagtccgcagt
ctgaagatggatgaaaaggtgtggactgaaaatcagctgttcctgttgctaggtaacgac
aaagtaaaccttttctgggcagctaacattccaccaagtgagatgctctgtccatcaagt
gacagtgaggagcgccagcgctttgttactgccaagtactgccaggggaaataccgccgc
taccatgcactgtttggccaacaggaagccctcaacaaagctctgtgcaacaccattcag
acaggtgatgtattggagactctgtcgctggtgttctgtggagcagatgtgaactgttat
acaggtgatccagagctgcccagccctgtttccattgcccagcactatggacagacactt
caggtggagttcctcactcacaaccacaacacagagctcccagggtcaagggctggagat
cacacaatcttagaggctgctctccccatctcacacactggttatctgttcaagactgcc
tcctcaacacgagcagttacagagcgcaaatctaaaggagattttagtcgtcgctggtgc
tctttgaaccaaggtaactttagctactatgagagtgagaagagctccagccagagtgga
cagatgaagatgagtgatgtcctttgtctggtggtcaatccccaagggaaacatggttat
ggtcattcctttgagctgtaccatgactctgggagagtctacctgtttggagaggattcc
cctgacacggtgagggagtggatcaaggccattggcaaggccctggtcccccctgtagca
gaggacctggtgggctggtcctttgagcgggtgggccggctgcgctacactgcgggccag
agcttccattgtccttgcctgggctggttctccctggggggctccagactgctcctcctc
ctccacggagaagaccacgcggataacatcgacctgcgaaaactacaggagctctccgtg
gagcaagaagctgctgctgtggtgctggtggacagaggcaggaggctgcgtttggagggg
gacaggaggcctgacttccagggctggctgagtggcatccagcagggcttagggagagga
gacggccccctggaccagcagcagcttactgagacagaagtccctgtcatcgtggactgc
tgcattagctatatcacacagcatggtttgaagtcagagggcatctatcggaggtctggt
gtgaactctaagatcgccgccctgctgttctctctccgccatgacccccgtcaggttcgt
ctgagtgaaggggagcgccaggtggataatgtggccaacgtcctgaagaggttcctcagg
gaagtgggagagggggttttcaatggccatcaggcctctctgccatggctccataccact
actgtcagtgagagaagagagagagtgtcccagtacaaggccctcctccacagcctcccc
ctagtcaacagagccactctgggggctgtcatcaaccacctctactgcgtccagtgcttt
gcagatgagaatcagatgaacatgcacaacctggccattgtgtttggtcccacgctcttc
cagacggacggcactgataacagcgcaggacaggtggtagaggagctcatccagaactac
caggatatcttcaatgtgaatgccgagcagcttcagaagcagctggacatgatctctcat
gtcatcaaagcacaagaagaacacaccgaggaggggaccccgtcacctctcaccatctgt
ggggtttacctggagaggaaggaggagggctctgagctgctggttcagatctcccaggca
gtgagtgctgaggagctagtgtgtgaggtcctgagacgcgggaacatccctacacaacag
ggggagtattggagctgcttcctggtcaacgacaaccaggagatggagcgtccattgcac
taccaggaacgagcgctggccatctatttctctctgggtaaagactgtcacctggtggtc
aggaggaactgctacatggatgccatgttaatctacatagctggcatggtagacgtgtcc
agaaacagcatgattaagttcagggatgagaagggtcaaagggggaagagaaccttcagc
agacgcctctgtgtactcgatggcacctctctcaggctctacaaagaagtaaagagtact
cagcctgagagggaatgtcaagtccatgctctgaaagtctactatggcatcaagaagagg
ctacagccaccatcatgctgggggatgactgtagtgtgtgagcaggcagaacgagacaaa
cagcagtggtacctgtgctgtgaatcaaagaacgaattgatcgagtggctggccactttt
atgaacctccagtggttgatttga
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integrated database retrieval system
