Salvelinus namaycush (lake trout): 120057738
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Entry
120057738 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057738
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120057738
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120057738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
120057738
NCBI-ProteinID:
XP_038862145
UniProt:
A0A8U1C6R5
LinkDB
All DBs
Position
Sna13:6235015..6277800
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AA seq
1541 aa
AA seq
DB search
MRPSLAVLPRTRNHPHTAHPQNAHGLSAHVGREHLSAPRRRSPHLRHTLSPENLRSLAER
GGAARDTASVVSSPMGLPRANSDTDLVTSQSRSSLTASTLEFTLGRGQNLVISWDIKEEV
DATDWIGLYHIDEISPSNVWDCKNRGVNGTQRGQIVWRLEPGPYFMDAETKICFKYYHGV
SGALRATTPCITVKNPGVLVCLSGEGQSEGQSSTDHPRKLVSFTLTDMHAVGLKKGMFFN
PDPYLKMSIHPGKRSGFPTFSHHGQERRSAIIANTTNPKWRGEKYTFVALMTDILNIEVK
DKFSKSRPIIKRFLGQLTIPVQRLIEKIPGLQPLSFSLCRRLPTEHVSGQMQFRVELTST
GPDGASPDSIIGVPNNGAPGTPSDDEDLPHLLPGVVTGGPSPTGSLGSQRSWEGGATAYP
VPDYRDFSGTEGRTTEGESYSGPLRLQRSLSEGLDAIEAPKGPGERPLGAASPKLRSSFP
THTRLSAMLHIDSDEDEERSGPTEIYPVPGSPLLLNGGPEGPEEEDVVPELQQDPDPEQL
EPRVAGDEQLVVTGEDCAPGGESNVAPELDLGLDFEDSSEPDVFSEVEEVPFFSEALSQS
LLAVGLEGPEEGQGPADNASSPIDTCSMAIAPLTVFSSSESCPITMSTAEEAEERAVAAI
DPGGDSFTDTPPTHQHVDDEGGGHTSANEVEGDTPSANELEPGEEISERMWSFQVSGDVP
QDEEGEEPRPAGAAVSVDSDAVAMETDGEDGAQVNGHPVHCLPSVRHDIHRYQRVDEPLP
PNWEARIDSHGRIFFVDHVNRTTTWQRPTGPPAPQGLTRSSSIQQMEQLNRRYQSIRRTM
TSERSEENTVDLPPEPTESDFLPQTIPEYRRESAVGHTSSRSRLSLLLQSPSAKFLCSPD
FFTVLHSNPSAYSMFTSNTCLKHMISKVRRDAHHYERYQHNRDLVAFLNMFTNNQLELPR
GWEMKHDQTGKPFFVDHNCRSTTFIDPRLPLQSAHSTSLLAHRQHLSRQRSHSAGEVVDD
TRHSSPPVMPCPSSTFSGSTRNQDLVPVAYNDKIVAFLRQPNIIEILQERQPELVRNHSL
KERLQFIRSEGVSGLARLSSDADLVILLSLFEEEVMSYVPPHALLHPSYCSSPQSSPGEN
THAKPRTQRANARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFN
QIMCYSRKDLQRSKLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTV
QISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDE
EFHQSLQWMKDNDIEDMLDLTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVK
WRIERGVAQQTESLVRGFYEVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGY
HDNHIVIRWFWAAVERFNNEQKLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKI
TSLPRAHTCFNRLDLPPYPSFSMLYEKMLTAVEETSTFGLE
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcactcgcggtccttcccaggacccgtaaccatccccacacagcccacccc
caaaatgcacacggattgtctgcacacgtggggcgggagcacctgtcggcaccacggagg
cgcagcccacacctgcgacacacgctcagcccagagaacctgcggagcctggcggagcga
ggcggtgccgccagggacacggcttctgtggtgagcagccccatgggtctcccgagggcc
aacagcgacacagacctggtgacatcgcagagccgctcgtcgctgactgcgtccacactg
gagttcacgctggggaggggccagaacctggtcatctcctgggacatcaaggaggaggtg
gacgccaccgactggatcggcctgtatcacatcgatgaaatcagcccatccaatgtgtgg
gactgtaagaaccgtggggtgaatgggacccagagaggacagatcgtctggaggctggag
cctggaccttacttcatggacgctgagaccaagatctgcttcaagtactaccacggcgtc
agtggagccctgagagcaaccaccccctgcatcactgtgaagaaccccggagtcctggtg
tgtctgtctggagaaggtcaaagtgaggggcagtcatccacagatcatcctcgcaaacta
gtcagctttactttgacagatatgcatgcggtggggctgaagaagggtatgttcttcaac
ccggatccctacctgaagatgtccatccaccctgggaagaggagcggcttccccaccttc
agccaccacggacaggagagacgctccgccatcatcgccaacaccaccaaccctaagtgg
cgaggagagaaatacacttttgtagcactgatgacagacattctgaacatcgaggtgaag
gataagttttctaaaagccgaccaatcatcaagcgcttcctgggtcagctgaccatccca
gtgcagaggctgattgagaaaatacctggtctccagcctctgagcttctctctgtgtcga
cggttgcccactgagcatgtgagtggccagatgcagttcagggtggagctcacatccact
ggacctgacggggcctctccagactctatcatcggtgtgcccaataacggggcccctggg
actccgtcagatgacgaggatcttccccacctactcccgggggtggtcactggaggcccc
tcccctactggatccctgggctcacagaggtcctgggaaggcggggccacagcctatcca
gtcccagactacagggactttagcggtacagagggcagaaccacagagggtgaatcctac
tctggccctctacggttgcagaggtccctgagcgaaggcctggacgccatcgaggccccc
aagggccccggagagaggcccttgggcgccgcctcaccgaagctgcgctctagctttccc
actcacacacgtctcagtgccatgctgcacattgactcagacgaagatgaggagcgctcg
gggcccactgaaatttacccggtacccgggtcccccctgctgctcaacgggggtcccgag
gggcctgaagaagaagacgttgtcccagagctacagcaggatcctgaccctgagcagctg
gaacccagggtggcgggagatgaacagctggtggtaacgggggaagattgtgcccctggt
ggtgaatccaatgtggcccctgagttagacctgggcctcgacttcgaggactcctcagag
cctgatgttttctcggaggtggaggaagttcctttcttctcagaggcgctgtcccagagt
cttttggctgtgggcctggaggggccagaggagggccaggggcccgctgacaacgcctcg
tcgccgattgacacctgctccatggcaattgccccactgacagtcttctcttcctcagag
agttgcccaatcacaatgtccacggctgaggaggcagaggagagggcagtagctgccatt
gacccagggggagactccttcactgacactccacccacccaccagcatgtagacgacgag
gggggcgggcatacatcagccaatgaggttgaaggagacactccgtctgccaatgagctg
gagccaggggaggagattagtgagcggatgtggagctttcaagtatctggggatgttccc
caggatgaggagggggaggagccaagacccgcaggggcggcggtatctgttgattcagat
gcagttgccatggagacagatggagaggacggtgctcaagtgaatggtcaccccgtgcac
tgcctcccctcagtgcgtcatgacattcaccgataccaacgagtggacgaaccgttacct
cctaactgggaggcgaggatcgatagtcacggtcgtattttctttgtcgatcacgtgaac
cggaccaccacgtggcagcgccccaccggaccccccgctccccagggcctgacccgctcc
agctccatccaacagatggagcagctcaaccgcagatatcagagcatcaggaggacgatg
accagtgagaggtctgaggagaacacagttgacctcccgccagagcccacagagagtgac
tttcttccccagactatccctgagtacaggagagagagcgcagtgggtcacaccagctct
cggtcgcgtctctctctgctactccagtctccaagtgcaaagttcctgtgcagcccagac
ttcttcaccgtgctgcattctaaccctagtgcctacagcatgtttacgagcaacacctgc
ctgaagcacatgatcagtaaggtgcgtcgggatgcccaccactatgagcgttaccagcac
aaccgggacctggtggccttcctcaacatgttcaccaacaaccagctggagctacccagg
ggttgggagatgaagcatgaccagaccggcaagcccttctttgtggatcacaactgtcgc
tccacaaccttcatcgacccgcggctccccctccagagtgcacactcaactagcctgctg
gcccaccgacagcaccttagccgccaacgcagccacagcgcaggcgaggtggtcgatgac
acgcgacactccagcccacctgtcatgccctgcccctccagcaccttcagtgggtccact
cgcaatcaggacctggtgcctgtggcctacaacgataagattgtggcgtttctacggcaa
cccaacatcattgagatcctgcaggagaggcagccagagctcgtccgtaaccactcactc
aaggaaaggttacagttcattcgcagcgagggtgtttccgggcttgctcgtctctctagc
gatgctgatctagtcatattgctcagcctgtttgaagaggaggttatgtcctatgtgcca
cctcatgccttactgcaccccagctactgctcctcccctcagagctcccccggtgagaac
acacatgcaaagccgcgtactcagcgagctaatgcacgcgcccctgccccttacaaacgt
gactttgaggccaaactgagaaacttctatcgcaagctggagacgaaaggctatggccag
ggacctgggaaagtcaaattgatcattcgtagagatcacctattggaggatgccttcaat
cagataatgtgctactcccgcaaagacctgcagaggagtaagctctacgtcagctttgtg
ggcgaggaagggctggactacagcggcccctcgagggagttcttcttcctggtgtcgagg
gagctgtttaacccttactacggcctgtttgagtactccgccaacgacacctacactgtg
cagatcagccccatgtctgccttcgtggacaaccatcacgagtggtttcgtttcagtggg
cgtatcctgggcctggctctgatccaccagtatctgctggatgccttctttacccgcccc
ttctacaagggcctgctgcgcatcccgtgtgacctgagtgacctggagttcctggatgag
gagtttcaccagagtttacagtggatgaaggacaatgacatcgaggacatgctggacctc
acctttaccgtcaacgaggaggtctttggacagatcacagagagagagctgaagccaggc
ggggcaggtattccagtgtcagagaagaataagaaggagtacatcgagcgcatggttaag
tggcgcatcgaaaggggtgtggctcagcagacggagagcctggtgcgaggcttctatgag
gtggtggacgtgcggctggtttctgtgtttgatgcccgggagctggagctggtgatcgct
ggcactgcagagatcgacctggcagactggaggaacaacacagagtacagaggagggtac
catgacaaccacatagtaatccgctggttctgggcggcagtggagaggttcaacaatgag
cagaaattgagactgctgcagtttgtgacaggcacctccagtattccctatgagggcttt
gcctccctcagaggtagcaatggaccacgcaggttctgtgtggagaagtggggcaaaatc
acctccttgcccagggcccacacatgctttaaccgtctggacctcccgccgtacccgtcg
ttctccatgctctacgagaaaatgctgacggccgtggaggaaaccagcacctttggcctg
gagtaa
DBGET
integrated database retrieval system
