Salvelinus namaycush (lake trout): 120057762
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Entry
120057762 CDS
T07522
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00260
Glycine, serine and threonine metabolism
snh00630
Glyoxylate and dicarboxylate metabolism
snh00670
One carbon pool by folate
snh01100
Metabolic pathways
snh01200
Carbon metabolism
snh01230
Biosynthesis of amino acids
snh01240
Biosynthesis of cofactors
snh04981
Folate transport and metabolism
Module
snh_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120057762 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120057762 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120057762 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120057762 (shmt2)
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120057762 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
120057762
NCBI-ProteinID:
XP_038862166
UniProt:
A0A8U1BWR1
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Position
Sna2:complement(740366..785778)
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AA seq
503 aa
AA seq
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MLSLTLRQIARPLCLRAPVALSSVGARRSQHAATRSVEQEAPWTGQDSLAQDDPEMWNLL
RKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQ
KRALETFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDT
KRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYARLIDYARIKKL
CTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTSTTHKSLRGARAGLIFYRKGVRSVD
KKGREIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAVALKQAQTPMFREYIGQVMRNSKAM
AEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALAP
GGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALDVKKKTGKLADFKNFLLEDPETVAR
MAELRKRVEAFARPFPMPGFEDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattgacgttgaggcaaattgcacggccattgtgcctgcgtgccccggtggcc
ctgagcagcgtgggggcgaggaggagccagcatgccgctacccgtagtgtggaacaggag
gccccatggactgggcaggacagtctggcccaggacgacccagagatgtggaacttgctg
cggaaagagaaggacaggcagtgtcggggactggagctcattgcctctgagaacttctgc
agtcgggctgcactggaggcccaaggatcctgcctcaataacaagtactcagagggctac
ccaggcaggaggtactatggtggagctgaggtggtggaccagatagagttgttgtgccag
aagagagccctggagacctttgacctggaccctgccctgtggggggtgaacgtccagccc
tactctggctctcctgccaacttcgctgcttacacagccgtcctcaaccctcacgaccgc
atcatgggcctggacctgcctgacggtggacatctgacccatggttacatgtctgacacc
aagaggatatctgctacctccatctattttgagtccatgccctacaagctcaatcctgcc
acagggctcattgactatgaccagctggagatgactgcccgtctcttccggcccaagttg
atcattgcaggcaccagcgcctacgctcgcctcattgactacgctcgcatcaagaagttg
tgtacggaggtgaaagcctacctgctggctgacatggcccacatcagtggtctggtagct
gcgaaggctgtcccctcgcccttcaagtacgctgatatggtcacgtccacaacgcacaag
tccctccgaggagccagggctggtctaatcttctaccgtaagggcgtgcgttctgtggac
aagaaggggagggagatccaatatgacctggaggaccgggtcaacttcgctgtgttcccc
tctctgcaggggggaccccacaaccatgccatcgctggggtggccgtcgcactcaaacag
gcccagacgccgatgttcagagagtacattggccaggtgatgcgtaactccaaggccatg
gctgaggccctactgagcaaaggatacacgctggtgtcaggggggacggagaaccatctg
gtgctggtggacctgaggcctaagggcatcgatggagccagagcagagagagttttggag
ctggtgtccatcacagccaacaagaacacctgccctggggacaagagtgccctggcgcct
gggggcctcaggctaggtgccccggcgctgacctccagacagttcaaggagacagacttt
gtccaggtggtggagttcatggatgaaggctttaagatcgccctggacgtcaagaagaag
actgggaaacttgcagactttaagaacttcttgttggaggatccagagacagtcgcccgc
atggcagagctgaggaaacgagtggaggccttcgcacgtcccttccccatgcccggcttc
gaggatcactag
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