Salvelinus namaycush (lake trout): 120057816
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Entry
120057816 CDS
T07522
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120057816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120057816
03036 Chromosome and associated proteins [BR:
snh03036
]
120057816
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120057816
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120057816
PBAF complex
120057816
GBAF(ncBAF) complex
120057816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120057816
NCBI-ProteinID:
XP_038862211
UniProt:
A0A8U1BWU1
LinkDB
All DBs
Position
Sna2:1155158..1191318
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AA seq
514 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGMGPGPPVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGPG
YPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPSVMDPSRKRPAPQQIQQVQQQRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGDGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcagctccaacgggaggtggtggcggtggaatggga
cccggacccccggtgcaaggtggaggaccaggcatgggacctggaacacctggaggaagg
atgggaccctcatcgggtgcacagaaccacctctatcgctctccgatgcctgggcctgga
tacccgagaccaggtgggatgcccccatccagccgtatgacccctcagggcccgcccatg
gggcctccaggctacggctccagccctgtgtcccgaccagggatgcccagtgtcatggac
ccctcccgtaaaaggcctgcaccccagcagatccagcaggtccaacagcagcgcaaccaa
cataccaagaagaagaagatggcggataagattttacctcagaggatccgggagctggtg
ccagagtctcaggcctacatggacctgctggcgtttgagaggaagctggaccagaccatc
atgaggaaacgcctggacatccaggaggcactcaagagacccatcaagcaaaagcgaaag
cttcgtatcttcatatccaacacgttcaaccctgccaagcccgacgcagaagacggggat
ggcactgttgcatcatgggaactgcgtgtcgaaggacgcctgcttgaagatactgctgtg
tccaagtatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtc
atcgagttggacaaggacctatatgggcctgacaatcacttggttgagtggcacaggact
gcgaccactcaggagacagacgggttccaggtgaagagaccaggtgatgtaggggtacgc
tgcactgtcctgctgatgctagactaccagccccctcagttcaagttggaccctcgcctg
gcccgtatgttggggatccacacccagaccaggccggtcatcatccaggccctctggcag
tatgttaagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaag
tacctgcagcagatctttgagacccagcgtatgaagttctctgagatcccccagcgtctc
catgctctcctgatgcctccagaacccatcattattaaccatgtcatcagtgtggatccc
aacgaccagaagaagacggcctgctatgacatcgatgtggaggtggacgacactctaaag
acccagatgaactctttcctcctatccaccgccagccagcaggagatagctggcctggac
aacaagatccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatg
ttgagcttcgccagagatccccagggcttcatcaacgactggctgcagtcacagtgccgg
gacctcaagactatgactgatgtggttgcgaacccagaagaagagaggagagccgagttc
tatttccaaccgtgggcccaggaggccgtgtgtcgttacttctactccaaggtccaacag
aggcgccaggagctggaacaagccctgggaatcagaaacacctag
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