Salvelinus namaycush (lake trout): 120057833
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Entry
120057833 CDS
T07522
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120057833
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120057833
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120057833
Protein phosphatases and associated proteins [BR:
snh01009
]
HAD phosphatases
Fcp/Scp phosphatases
120057833
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120057833
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
DUF3226
Motif
Other DBs
NCBI-GeneID:
120057833
NCBI-ProteinID:
XP_038862222
UniProt:
A0A8U1BYH2
LinkDB
All DBs
Position
13:5555904..5586007
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AA seq
269 aa
AA seq
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MDISSSIITQVTRDEEDNYTLREEGEFGKVFKKCSVAHDKPRSRGIFRSLFCCLCHKETE
QIPVNNNAPLSVEENGTISKQVPAKPLLPQLKSQDSGKICVVIDLDETLVHSSFKPVNNA
DFIIPVEIDGTVHQVYVLKRPNVDEYLKRMGELFECVLFTASLSKYADPVSDLLDKWGAF
QHRLFRESCVFHQGNYVKDLSRLGRDLNQVIIVDNSPASYIFHPDNAVPVTSWFDDMADT
ELLDLIPFFERLSKVEDVYDILKQQRTAS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgtcctcaataatcacgcaagtaacaagggatgaagaggataactatact
ctgcgcgaggaaggtgagtttggaaaagttttcaagaagtgttctgttgcgcatgacaaa
ccccgcagtcgtggcatttttcgaagtctcttctgctgcctctgtcacaaagaaaccgag
caaatcccagtcaacaacaatgcccccttatcggtggaagaaaatgggaccatttcaaaa
caagtcccggcaaaacctctgctacctcaactcaagtcacaagactcagggaagatctgt
gtggtgattgatttggatgaaacattagtgcacagttcattcaagcctgtgaacaatgct
gattttatcattccagtggaaattgatggaacagttcaccaggtatacgtgttgaagcga
cccaatgtggatgagtatctcaaaagaatgggggagttgtttgagtgtgttctgttcact
gccagtttatccaagtatgccgatccagtctccgacctgctggataaatggggtgccttc
caacaccgtctcttccgggagtcctgcgtgttccaccaaggaaactatgttaaagacctg
agtcggctgggcagggacctcaaccaagtcatcattgtagacaactccccagcctcctac
atcttccaccctgataatgctgtccccgtaacatcctggttcgacgacatggccgacaca
gagctactagatctcatcccattcttcgagagactaagcaaagtggaagatgtctacgat
attctcaagcagcagaggactgcaagctag
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