Salvelinus namaycush (lake trout): 120057835
Help
Entry
120057835 CDS
T07522
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120057835
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120057835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
120057835
NCBI-ProteinID:
XP_038862226
UniProt:
A0A8U1BWV1
LinkDB
All DBs
Position
Sna13:7446521..7488669
Genome browser
AA seq
701 aa
AA seq
DB search
MDVDEEENMSSSSTDVKENRNLDNVSSKEGEAVAEQLPNGSGGGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLLYKLLSQTGPVHAPVFVMTVEVNGQLFEGS
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
AQPEDSFYLGSNGSGCLNSLGEYSISSNPGANLAQALLPPPSSFTSPSSGKNPVMILNEL
RPGLKYDFLSESGESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGSDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYAQLEHFLSNKEEQLK
SIFMRCDKRGYRLKDNVLFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTK
IESGEGTIPVRTSNTIQTWDGVLQGERLLTMSCSDKIARWNVLGIQGSLMSYFTEPIYFS
SIILGSLYHADHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWA
VGDQALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKVQNGPPHTRMIKVSKPSSYHD
AKQAAVEYHNAKQTLIKVFHKSGLGAWVKKPTEQDQFSLNS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgaagaggagaacatgagttcgagcagcaccgacgtaaaggaaaaccgt
aacctggacaacgtctcctccaaagagggggaggctgtggctgagcagctccccaacggc
agtggcgggggcagcaggaagcgtcccttagaggagggaaacaatggccacacgcactcc
aagttccgggccaagaagcgtaagaaaacgccaggcccggttctacccaagaatgccctt
atgcagctgaatgaaattaagccggggctgctgtataagctgctgtctcaaacgggtcca
gtccacgctcccgtgtttgtcatgaccgtcgaggtcaacgggcagctgttcgagggctca
ggtcccaccaagaagaaggccaagctgaatgcggcagagaaggccctgcgctcctttgtc
cagttccccaacgcctccgaagcgcacctggctatgggccggacactgacagtcaacacg
gacttcacatccgaccaggccgacttcccagacatgctcttcaacgggtttgagacgccc
gcacagcccgaggactccttttacctgggctccaatggcagcggctgcttaaactcgctg
ggagagtactccatttcttccaacccaggtgctaacttagcccaggccctgttgccccct
ccctcatccttcacctcgccctcgagcggcaagaaccctgtcatgatcctcaatgagctg
aggccgggcctcaagtatgactttttgtccgagagcggcgagagccatgcaaagaacttt
gtcatgcaggtgtcggtggactcacagcagtttgagggctctggacgaaacaagaagctg
gccaaggcccgggccgcccaggcagccctctcagccctcttcaacatgcagctggaccag
acgccctcccgacagcccatccccagagagggactgcagctccacctaccccaggtcctc
gccgacgcagtctctcgcctggttgtggacaagttcagcgagctgacggacaacttcact
tccccccacgcgcggcggaaagtcctggcaggggtcgtcatgacaacaggctcggacgtg
aaagaggcccaggtgatctgcgtctccacgggcaccaagtgcatcaacggcgagtacatg
agcgaccgcggcctggcgctcaacgactgccacgcagagattatcgcccgccgctcgctc
atccggtacctctacgcccagctggagcacttcctaagcaacaaggaggaacagctgaag
tctatattcatgcgctgtgacaagcgtggctaccggctaaaggataacgtcctgttccac
ctctacatcagcacctcgccctgcggagacgcacgcatcttctcaccgcacgaggccggc
atggaagaccaaggagaccgacaccccaaccggaaggcgcgaggccagctgaggaccaaa
atagagtctggggaggggaccatccccgtgaggaccagcaacaccatccagacatgggac
ggggtgctgcagggagagaggctgctcaccatgtcctgcagtgacaagatcgcaagatgg
aacgtgctgggcatccagggctctctgatgagctacttcacggagcccatctacttctcc
agcatcatcctgggcagcctgtaccacgccgaccacctctcccgggctatgtaccagcgc
atcgccgacatcgaggacctgccccaacagttcagcctcaacaggcctctactgagcggc
atcagtaacgcggaggcgaggcagccgggcaaggcacccaatttcagcgtgaactgggcg
gtgggcgaccaggcgctggaggtcatcaatgctaccacgggcaaagacgacatggggcgt
gcctcgcgcctctgcaagcacgccctctacagccgctgggttcgcctgcattccaaggta
cagaacggtccgccacacaccagaatgatcaaggtgtccaagcccagctcgtaccacgac
gccaagcaggcggcggtggagtaccacaacgccaagcagacgctcatcaaggtcttccac
aagtcgggcctgggggcctgggtgaagaagcccaccgagcaggaccagttctccctcaac
tcctga
DBGET
integrated database retrieval system
