Salvelinus namaycush (lake trout): 120058072
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Entry
120058072 CDS
T07522
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120058072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120058072
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
120058072
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
120058072
NCBI-ProteinID:
XP_038862478
UniProt:
A0A8U1C4L3
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Position
Sna13:28627045..28631517
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AA seq
590 aa
AA seq
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MAVHAEGIVAIVIFYLLILGVGIWAAWKNKNSGVSEGQDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPDFGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDIDINMSVVISALIAIFYTLV
GGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSSISVTAKEAVYQTPWLGKIDSADTW
MWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVLIGAIGAST
DWNQTTYGAIPPKEKDQSDMILPIVLQHLCPPWISFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQSATDREIVWVMRITIFVFGALATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFIKGTNTYGSVAGYVFGLLLRIGGGEPYLKLPPFIYYPGWVQQEKIHHLTGDV
EYFIQQRFPFKTVSMLASFLGNVAFSYLLKYLFESGTLSHKYDFMDAVVSKHSKEIMDKT
TLVSSDNIILSEMEPVKTRLSNALAGTFTNTEALSDDEESSPESLNNDHE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgtccacgccgaggggatcgtggctatagtgatcttctacttgctgattctgggc
gtggggatatgggccgcgtggaagaacaagaactcaggggtgtcggagggccaggaccgc
agtgaaaccatcatggtgggcgggagggacattgggttgtttgtcggtggattcactatg
accgctacatgggtaggcggcggctacatcaacgggacggcggagtatgtctacctgcct
gacttcggcctggcctgggcacaggctcccttcggatacgccctcagtctggtagtaggt
gggctgttcttcgccaagcccatgcgctcccggggatacgtcaccatgctggacccgttc
cagcagatatacgggaagcgtatgggggggctgctcttcattccggcgcttatgggggag
attttctggtccgctgccatcttgtcagcgctgggagctactctgagtgtgatcgtggac
attgacatcaacatgtcagtggtgatctcagccctaatagctatcttctacaccctggtg
ggagggctgtactctgtagcctacactgacgtggtccaactcttctgtatcttcctggga
ctgtgggtcagtgtgccatttgccctgtccaacccagccgtgtcaagcatcagtgtgaca
gctaaagaggctgtgtaccagacaccctggctgggtaagatagactcagcagacacctgg
atgtggatcgacaacttctgtcttctgatgttgggggggataccgtggcaggtgtatttt
caacgggttctctctgcctcttcagctacctacgcccaggtactgtcctttattgctgcc
gcaggctgcctggtcatggctgtcccctccgttctcataggagctataggagcctccaca
gactggaaccagactacatatggggcaattcctcccaaagagaaggaccaatcagatatg
atcctgcccatcgtgctgcagcacttgtgcccaccctggatctccttctttggtctggga
gcggtgtctgctgctgtgatgtcatcagctgactcctccattctatctgccagttccatg
ttcgccagaaacatctaccagctggccttcagacaatctgcgacagaccgtgagatcgtg
tgggtgatgcgtatcaccatctttgtgttcggcgctcttgccaccgccatggcgttgcta
acggggaccgtgtatggcctgtggtacctgagctccgacctggtgtatgttatcatcttt
ccccagctgctcagcgtgctcttcatcaagggaaccaacacgtacggctcggtggccggc
tatgtcttcggtctgctgctgcgtatcgggggaggagaaccctacctcaaactacccccc
tttatctactaccccggctgggtgcaacaggagaagatccaccacctgactggagacgtg
gagtacttcatccagcagcgcttcccctttaaaacggtctccatgctggcctccttcctg
ggtaacgtggccttctcctacctgctcaagtacctgtttgagtctgggactctgtctcat
aagtatgacttcatggatgctgtggtgtccaaacacagtaaggagatcatggacaagacc
acgctggtcagtagtgacaacatcatcctgtcggagatggagccggtcaaaacgcgcctc
agcaacgcactggccgggacatttacgaacacagaggctctcagtgacgatgaggagtcc
agccccgagtccttaaacaacgaccatgagtag
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