Salvelinus namaycush (lake trout): 120058101
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Entry
120058101 CDS
T07522
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120058101
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120058101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120058101
04090 CD molecules [BR:
snh04090
]
120058101
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Tumor necrosis fators
120058101
CD molecules [BR:
snh04090
]
Proteins
120058101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
120058101
NCBI-ProteinID:
XP_038862504
UniProt:
A0A8U1C605
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Position
Sna13:33394179..33399031
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AA seq
337 aa
AA seq
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MVSAGPSPEAVGPVPGQESGGRRLSWPVLLLTLAAVTSSSLSALSLFHLLALRAEVEGLR
SEVFRRREETLQQMSSSSRTRRSSSAPPHPPDPQPPPHPPDPQPPPHPPDLQPPPHPPDP
QPPPHLPDPESLPHTPEPQPPPHPPDCQPPPHTPGPQPPPHPSESQTRLIFIRKRSVGTG
PENTVSYSLVSQPCLQMLADSNRETFQKEFALEPHTGIPWQEGLRRGSALEAESDSILVR
EEGYYFVYSQVYYMDRIFAMGHVVNRKKRNVVGDEAQHVTLFRCIQDMNPVYPYNTCYTG
GIVKLEVGDRVELLIPRSTANISLDGDSTFLGAFRLV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgcaggtccaagtcctgaggctgttggccctgtgcctgggcaggagtctggg
ggtcggaggctctcctggccggtcctgttgctgaccctggcggcggtcacctcatcgtct
ctctcggctttatctctgttccatctgctggctctcagggccgaggtggaggggctccgg
tcagaggtatttcgcaggagagaggagacactgcaacagatgagcagcagctccagaacc
aggaggagcagctccgcccctccacacccccctgacccccagccccctccacacccccct
gacccccagccccctccacacccccctgacctccagccccctccacacccccctgacccc
cagccccctccacacctgcctgaccccgagtcccttccacacacccctgaaccccagccc
cctccacacccccctgattgccagccccctccacacacacctggtccccagccccctcca
cacccctctgagtcccagactaggctgatcttcatcaggaagaggagtgtgggcacagga
cctgagaacacagtgtcctactctctagtgtctcaaccctgtctacagatgctggcagat
agcaacagggaaacattccagaaagagtttgcattggagcctcacacagggatcccctgg
caggaggggcttaggagaggctccgccctggaggcagagagtgacagcattcttgtcaga
gaggagggatactactttgtctacagccaggtgtactacatggacaggatctttgccatg
ggtcatgtggtgaacaggaagaagaggaatgttgtgggagatgaagctcagcatgtcaca
ctgttccgctgtatccaggacatgaaccctgtttacccatacaacacctgctacacaggg
ggtatagtgaaactggaggtcggggacagggtggagctgctgatacctcgctctacagcc
aatatttctctggatggagattctactttcctgggggcctttagactggtctga
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