Salvelinus namaycush (lake trout): 120058104 Help Entry 120058104         CDS       T07522                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism snh  Salvelinus namaycush (lake trout) Pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120058104  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120058104   09142 Cell motility    04820 Cytoskeleton in muscle cells     120058104  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:snh04147]     120058104    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120058104 Exosome [BR:snh04147]  Exosomal proteins   Exosomal proteins of other cancer cells    120058104 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120058104 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  120058104 NCBI-ProteinID:  XP_038862507 UniProt:  A0A8U1BYV5 LinkDB All DBs Position Sna13:34052289..34088826 Genome browser AA seq 1629 aa AA seqDB search MVYDFVAVGQPGLLGSQGPQGPSGRLGDPGVQGVQGEKGDRGRGGIIGPKGAVGMTGVPG FSGLDGIPGHPGQAGPRGKPGADGCNGTHGDSGSAGQPGYDGQPGYNGQAGRKGQKGDTL ELSVFMEHFRGDSGLPGYPGLVGPQGYPGRSGYRGLPGPQGPRGYPGLPGPKGTMTKVLK GVKGEPGDAGKPGPQGNSTHSQIGPFTGPNGIKGEKGLKGDTGPEADNKGETGVIGMPGQ RGIAGRDGEQGLRGDLGEPGLMGRDGQKGARGEPGELIYDDGPSGGRDRVGPPGPPGQLG PQGQRGLQGEKGIPGRAGPPARKDHDQQQVVDLWGPFGEPGVKGEMGAPGELGIPALSPG PPGINGLPGLGGPPGPPGSSGADFYRGFSGQRGRPGSAGRKGLKGDHGLCECNIVHSPPG LPGPAGSQGDPGMSGEVGRQGESGEPGPRGVIGLPGFPGATGQPGPKGRKGELIQAKEKG YAGDPGDPGATGDPGMQGFPGPIGINGLPGNRGPSGDAPAGLTGEKGYQGRPGLPGLLGQ MGEPGRVLGATKGVRGLQGDDGERGHAGIEGRAGDPGVSGCSLRGDGEQNDITGDCDAIP GPPGMPGPPGPHGLEGFLGLPGQKGSTGLLGDNGAKGEIGDQGRGGSPGYPGSRGLHGDL GQRGSKGNSGTQGLPGQQGRNGEPGEKGPHGEIWGASTGQPGEVGLPGEQGPKGFSGEPG NEGYPGMGGMPGMIGFKGDVGPSGLQGEQGGPGAAGKYGWPGVPGPAGVPGPTGSTGQPG LSGNRGDQGDPGTPGPIGLKGTLGEFGSQGAEGNTGDQGDPGVPGPTGHSGLPGFKGIKG SRGMSGFGGMPGVSGLKGFSGQKGETGNPGEFGQKGNMGDYGSKGDRGLRGPTGEKPHIS RQIIKDMKGTKGEDGTTGQIGFTGPRGPKGFPGVPGMEGYHGIPGDPSDEKGFQGNPGAQ GLPGPKGMPGLTGSNGISGFPGMSGHRGNKGNPGAYGSSGDPGVKGVKGEGGAVIDMPGS TGLRGQDGFPGVPGQKGYIGNLGDRGGGGFHGIEGMKGVPGEPGTGGPIGSNGQQGFPGN QGTKGWPGVPGESGTHGQPGFPGQRGFPGLKGIFGLDGLKGQKGIPGLPGQDNFGTPGDP GAKGARGETGIPNSEVGTPGSLGLKGVQGQPGDQGQVGPPGFQGPQGPQGTSDRPGPSGE PGFPGPKGLPGFPGPRGFPGEPSQYGEKGLAGQYGITGFPGLKGKQGDQGPSGYKGQSGV SGKKGVKGGQGMMGFPGRSGFQGDRGPSGPKGSTGLTGYPGAPGNQGPAPLPPRMPGERG APGPQGIRGPEGVRGESGPKGPPGDPGYFGPQGQKGMPGVGGRPGTPGYRGNVGGRGHLG LQGMEGHRGNPGTTGLHGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYFEG QEKAHNQDLGLAGSCLPRFNTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVEEGD IKPYISRCSVCEAPSVAIAVHSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLSS PGSCLEDFRTTPFIECNGAKGTCHYFANKHSFWLTSIEQSFHAEPASETLKAGQLLSRIS RCQVCMKNL NT seq 4890 nt NT seq  +upstreamnt  +downstreamnt atggtttatgactttgtggctgtgggccagcctggtcttcttggttctcagggcccccag gggccttcaggacgtctaggggacccaggagtccagggagtccagggagagaagggcgac aggggcagaggaggcatcatcggccccaagggtgctgtggggatgactggtgttcctggg ttttccgggttggacggtattcctggccacccaggacaggctgggcctcgtgggaaacct ggagcagacgggtgcaacggaacacacggagactcagggtcggcaggtcaaccaggctac gatggccagcccgggtataatggtcaggcgggcaggaagggacagaagggagacactctg gagctgagtgtgttcatggagcacttcaggggagattcagggctgcccggatatcctgga ttagttggtcctcagggttacccaggtcggtctggctacagaggactcccgggaccacag ggcccacgagggtatcctggtcttcctgggccaaagggcaccatgaccaaagtgttgaaa ggggtcaaaggagaacctggtgatgctggaaagcctggtccccaagggaactccacccat tcccagatcggtccatttactggacccaatggcataaagggtgagaaagggttgaaaggt gatactggtcctgaggctgacaacaaaggagagactggtgttatagggatgcctggacaa cggggcatcgctggtcgggatggagagcaaggactgaggggggacctgggagaaccagga ctgatgggcagagatggtcaaaagggtgccagaggagaaccaggggagctgatttatgat gatggtccctcaggagggcgggacagagttggtccccctggtcctcctggacagctgggt ccccagggccagaggggtctacagggggagaaaggtattccaggccgcgctggacctcct gccaggaaggatcatgatcaacaacaagtggtggatctgtggggtccgttcggagagccg ggggtaaagggagagatgggcgcaccaggagagctaggtatccctgccctcagccccgga cccccaggtatcaatggcctgcctgggctcgggggcccacccggaccaccaggatcatca ggggcggacttctacaggggattttcagggcagagagggcggccaggctctgcgggaaga aaaggactgaaaggtgatcacgggttgtgcgagtgcaacattgtgcattcccctccgggc ctgcccggccctgctggtagccaaggcgaccctggaatgagtggcgaggttggtcggcag ggagagtcaggagagccaggaccccgaggtgtcatcggactgcctgggttccctggtgcc acaggacaaccgggtccaaagggcaggaagggcgagttaattcaggccaaagagaaagga tatgccggcgacccaggagacccaggtgcgacaggtgacccaggaatgcagggcttccct gggcctattgggatcaatggactccctgggaatcgtggtccttcaggagatgcacctgct gggctcactggagaaaaaggttatcagggccggccgggtctgcctgggttgttgggacag atgggagaaccaggacgggttctaggtgccactaaaggggtccgagggttgcaaggcgat gatggggagcggggtcatgctggtatcgaaggtcgagctggagatccaggagtgtctggc tgtagtctgagaggagatggagaacagaatgacatcacaggtgattgcgatgccataccc ggaccacccggtatgccaggaccaccaggaccccacgggttagaaggtttcctaggtctc ccaggtcaaaaaggatcaacaggtctacttggagataacggggccaaaggagagatagga gatcaaggcagaggagggtcacctggatatccaggttctaggggcctccatggagacttg ggtcagcgcggctcaaagggtaattctggaacccaaggtctgccaggtcaacagggtcgg aacggggagccaggagagaagggacctcacggggagatctggggagcgtcgaccggacaa cctggagaagtgggtcttcctggagagcagggacctaaagggttcagcggagagcctgga aacgagggctacccagggatgggtggcatgcctggtatgattgggttcaagggtgacgta ggtccttcaggtctgcagggggagcaaggaggaccgggagctgctgggaagtatggctgg ccaggtgtacccggaccggctggtgtccctggaccaacaggaagcaccggacaaccaggt ttgagcggaaacaggggtgatcagggggaccctggcacaccagggcccataggactgaag gggacactgggggagtttggtagtcagggcgctgagggaaacaccggagaccagggtgac cccggagtgccaggacctacaggacactctggcctgccagggttcaagggtatcaaaggg tctcgtggcatgtcagggtttggaggaatgcctggtgtgtcaggcctgaagggcttctct ggacagaaaggagagactggcaatcccggcgaatttggacagaaaggaaacatgggcgac tatggttcaaagggtgaccgtggtctgaggggtccaactggcgagaaaccccacatctct cgtcagatcatcaaagacatgaaggggacaaaaggagaagatggaaccacaggacagatc ggattcactggacccagaggtcctaaaggttttcccggtgttccgggaatggagggctac cacggcattcccggagaccccagcgatgagaagggtttccaaggcaacccaggcgcgcag ggacttccggggccaaaaggaatgcctggtctgacaggatcaaacggaatcagcggcttt cccgggatgtctggtcacagggggaataaaggtaaccccggtgcctacggatcctcagga gatccaggagtgaagggtgtcaaaggtgaggggggtgccgtaatcgacatgcccggatcc acaggactgagggggcaggatggtttccctggggttccaggtcagaagggctacattggg aatctgggagacaggggcggtggaggtttccatggtattgagggcatgaagggcgtgcca ggtgaacctggcacaggaggacctataggatctaatggtcaacaagggtttccaggcaac cagggtacgaagggatggcctggggttcccggagaatcaggcacacatggacaaccaggt ttccccggacagagaggtttcccgggactaaagggtatattcggactggatgggctgaag ggtcagaagggcatccccggacttccaggtcaggataactttggaaccccaggtgacccc ggtgctaagggagcgaggggagagacaggtatacccaactccgaggtcgggacacccgga tcgctgggtttgaagggagttcaaggacaaccaggtgaccagggccaggtgggaccccca gggtttcagggcccccaagggccacagggcacctcagacagacccggaccatcaggagaa cctggcttccctggacccaaaggactgccaggtttccctgggccccgtggtttccctggt gagccctctcaatatggagagaagggtttagctggccagtatggcatcactggattccct ggtctgaaaggaaagcagggggatcagggaccatcaggatacaaaggacagagcggagtg tctgggaagaaaggtgtgaagggaggtcaagggatgatgggatttcctggtaggtctggt ttccaaggagaccgaggtccttccggcccaaaaggaagtactggactcacaggttatcca ggagccccaggtaaccagggcccagccccactaccccccaggatgccaggagagaggggt gctccaggtcctcagggtatccgaggaccggagggggtacgaggggaaagcggcccgaaa ggaccccctggagatccaggctacttcgggccccaggggcagaaggggatgccaggggtg ggtggcagaccaggtacccctgggtaccgtgggaatgttggagggaggggccatcttggt ctgcagggcatggaaggtcaccgtggtaacccaggtactacagggttgcatggcatgccg ggccgcagtgtgagcgtgggatacctgctggtgaagcacagccaatcagagcagaccccc atgtgccccgtgggcatgtcgaagctgtgggacggctacagtctgctgtacttcgagggc caggagaaggcccacaaccaggacctaggtctggcgggctcctgcctccctcgtttcaac accatgcccttcctgtactgcaaccccggagacgtctgctactacgccagccgcaacgac aaatcatattggctgtccaccaccgcgccccttcccatgatgcctgtggaggaaggtgat atcaaaccctacatcagccgctgctctgtgtgcgaagctccgtccgttgccatcgccgtg cacagccaggatattaccatcccacaatgccctgctggctggcgcagcttatggattggc tactccttcctcatgcacacggcagcaggtgacgagggtgggggtcagtctctgtcgtct cctggttcctgtctggaggacttccgtaccacgcccttcatcgagtgtaacggggccaag ggcacctgccactacttcgccaacaaacacagcttctggctcacctccatcgaacagtcc ttccatgccgagcctgcctcagagaccctgaaagcaggccagctcctctcacgcatcagc cgttgtcaggtctgcatgaagaacttgtga

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