Salvelinus namaycush (lake trout): 120058147
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Entry
120058147 CDS
T07522
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120058147
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120058147
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120058147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
FAZ1_C
Beta-prop_RIG_2nd
WD40
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Lgl_C
Synaptobrevin
FBF1
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120058147
NCBI-ProteinID:
XP_038862542
UniProt:
A0A8U1ETY0
LinkDB
All DBs
Position
13:complement(44323976..44453661)
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AA seq
1768 aa
AA seq
DB search
MPALTVTQPALTVTRPALTVTRPALTVTRPALTVTRPALTVTRPALTVTRPALTVTRPAL
TEQLTPEQEQLTPEQEQLTPEQEQLTPEQEQLTPEQEQLTPEQEQLTQEQEQLTQEQEQL
TPEQEQLTQEQEQLTPEQEQLTPEQEQLTPEQEQLTQEQEQLTPGEKMYKAKGGCELSVP
VELFLFRVVFVQCELFCSVFLSVCELFLFLCELFLFRCGLSGYLQVSRTLSGASRSLGLS
GSLVPPVSRTLWCLQDSLVPQLSRLSGASSELGTLGHYDSLGACRSLGLSGALQVTMTPG
ASTSLGLWFSKDSLVPPGRVLGLSGLQDSLVPSRSLGLSGASRVSRTISVLLHVTEELSG
GLQDSLVPPGYYGLSGHYDSLVPAGHYDCGASTSLGLPLDSLVLQVTMTLWCLQVTMTRW
CIHVSRTLWCLHVSSTLCYLQVYGTRWCLHVSRTLCCLHDSRTPGASTSLDSLVIDSLVP
PGLYDLWSIGTRWCLHVSRTLCCLHDSRTPLFASMILGLSGCLTSLGLSGASRSLGLLDS
LVPPRSLDSLVPPGLYDSLVYGTRGASTSLDSLLPQVTRTLGASRVSMKLFWYLQVYGLV
TMTLWYLQDSLVPSTSLDSLVPPGSLVPPVSRTLWCLQVSRTSGPSSSLGLSGPPGLQDS
LVPPGLQDSLVPPGLQDSLVPPGLQDSLVPPGLKDFSGASRSYDSLVPHDSGLWSLGLSG
ASMSLDLSVASRSLDLSVASTSLGLSSVLSGLSMWLSATSLALSGASRSLGLTGTSTSLG
LSGASKSLGLTGTSTSLGLSGAYRSLDLSGASRSLGLSGASKSLALVFKDGFEHNKWKAI
HSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKEGRKESCKPILKVEYK
TSRNSEPYVIFSGGLSYDKAGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDTPYSNEIQ
DPYAVVLLLEKDLIMVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDIIPVLYSVG
AKQKKTGYSHKEWPVSGGTWTLGSQTYPEVIVTGHADGTVKFWDASAITLQMLYKLKTSK
VFENPNAGEGRAVELVEEDPYAIQMVSWCPQSRLFCVVGISAHVILYRFSKHDANTEIVS
LEVRPQFDSEDVISPSEIENNPCFSDTSSHSSQMPGSPGNGSQDSLHYLKVKSRPVQMPP
GYQAELVVQLQWVDREPPQQITSLDINSAYGLLAFGSSNGLVVVDYIQKTILRRVSTLDL
YGAADPFQRLTRSPRKNRQSTSDFCMRSLSHFYSDSKKRNRKSYQSLTELSDNQVAMDME
RSKSPTSDHVNGHCTSPTSQPCSVGKSRIPGAPEGPRLTRRGPGRPPFRKAQSAACMEIS
LPVPSITEESRENSFGRSRSSSVSSIDRDTKEAVTTLQFGESYGRKGDSLPAACLWVGTS
LGVVLLLPISIPTERERLEEPVTMGPSGTVLMLKGSVLCFSFLNCGGTLIQSPYEVWREP
NVPEDPDEPRRRKLVNLSPLSSQEACGDGHLTVVCSEKQAKVILMPTQAVLFTHNVTESS
FLLRADVVSVCNSVCLACFCANGHVMTLSLPSLRLLMDTNYLPLTDVRIARTFVFTNGGQ
ALYLTSPTEIQRIAYSQEMTDNLQDMLGELFTPIETPEAQNKGFLKGFFGGNTQTFDREE
LFGEAAAGKASRSLAQHIPGPMRLENVRAAAGGVVGDLARARIALEQRGERLGELEERTT
LMLKSAETFSTHAHQVMLKHKDKKWYQL
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctgactgtcacgcagcctgccctgactgtcacgcggcctgccctgactgtc
acgcggcctgccctgactgtcacgcggcctgccctgactgtcacgcggcctgccctgact
gtcacgcggcctgccctgactgtcacgcggcctgccctgactgtcacgcggcctgccctg
actgaacaactcacaccggaacaggaacaactcacaccggaacaggaacaactcacaccg
gaacaggaacaactcacaccggaacaggaacaactcacaccggaacaggaacaactcaca
ccggaacaggaacaactcacacaggaacaggaacaactcacacaggaacaggaacaactc
acaccggaacaggaacaactcacacaggaacaggaacaactcacaccggaacaggaacaa
ctcacaccggaacaggaacaactcacaccggaacaggaacaactcacacaggaacaggaa
caactcacaccaggggagaaaatgtacaaagcgaagggaggctgtgagttgtctgttcct
gtggagttgttcctgttccgggtagtgttcgttcagtgtgagttgttctgttccgttttc
ctgtccgtgtgtgagttgttcctgttcctgtgtgagttgttcctgttccgctgtggactc
tctgggtacctccaggtctccaggactctctccggtgcctccaggtctctaggactctct
ggatctctggtgcctccagtctctaggactctctggtgcctccaggactctctggtccct
cagctctctagactctctggtgcctccagcgaactagggactcttggtcactatgactct
ctgggtgcctgcaggtcactaggactctctggtgccctgcaggtcactatgactcctggt
gcatccacgtctctaggactttggttctctaaggactctctggtgcctccaggtcgtgtc
ttaggactctctggtctccaggactctctggtgccatccaggtctctaggactctctggt
gcctccagggtctctaggactatctcggtgctcctccacgtcactgaggaactctctggt
ggcctccaggactctctggtgcctccaggttactacggactctctggtcactatgactct
ctggtgcctgcaggtcactatgactgcggtgcatccacgtctctaggacttcctctggac
tctctggtgctccaggtcactatgactctctggtgcctgcaggtcactatgactcgctgg
tgcatccacgtctctaggactctctggtgcctccacgtctctagtactctgtgttacctc
caggtctatgggactcgctggtgcctccacgtctctaggactctctgttgcctccacgac
tccaggactcctggtgcctccacgtctctggactctctggtcatagactctctggtgcct
ccaggtctctatgatctctggtctattgggactcgctggtgcctccacgtctctaggact
ctctgttgcctccacgactctaggactcctctgtttgcctccatgatcttaggactctct
ggttgcctcacgtctctaggactctctggtgcctccaggtcactaggactcttggactct
ctggtgcctcccaggtcactagactctctggtgcctccaggtctctatgactctctggtc
tacgggactcgcggtgcctccacgtctctagactctctgctgcctcaggtcactaggact
ctcggtgcctccagggtctctatgaaactcttctggtacctccaggtctatggactcgtc
actatgactctctggtacctgcaggactctctggtgccctccacgtctctagactctctg
gtgcctccaggatctctggtgcctccagtctccaggactctctggtgcctccaggtctct
aggacttctggtccctccagctctctaggactctctgggcctccaggtctccaggactct
ctggtgcctccaggtctccaggactctctggtgcctccaggtctccaggactctctggtg
cctccaggtctccaggactctctggtgcctccaggtctcaaggacttctctggtgcctcc
aggtcatatgactctctggtgcctcacgactctggactctggtctctaggactctctggg
gcctccatgtctctagacctctctgttgcctccaggtctctagacctctctgttgcctcc
acatctctaggactctcgtcggtcctctcaggcctctctatgtggctctctgccacgtct
ctagcactctctggtgcctccaggtcactaggactcactggtacctccacatctctagga
ctctctggtgcctccaagtcactaggactcactggtacctccacgtctctaggactttct
ggtgcctacaggtctctagacctctctggtgcctccaggtctctaggactctctggtgct
tcgaagtctctagcactcgtctttaaagacggtttcgaacacaacaagtggaaggctatc
cattctgtgagctggcaccatgaagggaagcagttcatgtgtagtcactcagacggcagc
ctgactatgtggaacctgaggaacacagccaggcctattcagatcacatatcctcatggg
aagatactgaaggaagggaggaaggagtcgtgtaagcccatcctcaaggtggaatacaag
acctccagaaacagtgagccctacgtcattttctctgggggtctgtcgtatgacaaggct
gggggacggagacccaccttgaccatcatgcatggcaaggccatcacggtgctggagatg
gaccaccctatcgtagagttcctggtgctctgtgacaccccatactccaacgagatccag
gatccctatgcagtggtgctgctcctagaaaaagacttaatcatggttgatctgacacag
agcaatttccccatctttgagaacccataccccatggatatccacgagtctcctgtcacc
tgtacggcctacttcgccgagtgccccccggacatcatcccagtcctctactccgtagga
gccaagcagaagaagactggctacagccacaaggagtggccagtgagtggcggtacgtgg
acattaggctcacagacctacccagaggtaatcgtcacaggacacgcagacggaaccgta
aagttttgggacgcctctgctattactctccagatgctgtacaagctgaagacgtctaag
gtgtttgagaaccccaatgcgggtgaaggccgggcagtcgagctggtagaggaggaccct
tacgccattcagatggtcagctggtgcccgcagagccgtctcttctgtgtggtgggcatc
tctgcccacgtcatcctctaccgcttcagcaaacacgacgccaacacagagatagtgtca
ctagaagtgcgtccgcagtttgattcggaggacgtcatctccccatcagagatagagaac
aacccgtgtttctcggacaccagttcccactcctcccagatgcccggtagccccggcaac
ggctcacaagacagcctccactacctcaaggtgaagagtcgtccagtgcagatgcccccg
ggataccaggctgagttggtggttcagctgcagtgggtggatagagagcccccccagcag
atcaccagcctggacatcaactctgcctatggccttctagcgtttgggagcagcaatggc
ctagtggtggtggactacattcagaagaccatcctgaggcgtgtgagcacgttggacctg
tacggcgccgctgaccctttccaacgtctcacacgctccccacgcaagaacagacagtcc
acctcagacttttgcatgcgcagcctgtctcatttttattcagattcaaagaaaaggaac
cgtaagtcctatcagagcctaacggaactgtccgacaaccaggtggccatggacatggag
agaagcaagtcgcccacctcagatcatgtcaatggacattgcactagccccacctcgcag
ccatgctccgtggggaagtctcgcattccaggggctcctgagggcccgcggctcacccgg
agagggcccggccgaccacccttccgcaaggcccagtccgccgcttgcatggagatctct
ttgcctgttccctccatcacggaagaaagcagagagaattctttcggccgttcgcggagc
tccagtgtgtccagcatcgaccgcgacaccaaggaagcggtgaccacgctgcagttcgga
gagtcctacggtcgtaaaggtgactccctgcccgccgcctgcctgtgggtgggcaccagc
ctgggcgtggtcctcctactgcccatatccatccccacagagagggagaggctggaggag
cctgtcaccatggggcccagcggtaccgtcctgatgctgaagggctcagtgctatgcttt
tccttcctgaactgtgggggcactcttatccaaagtccctacgaggtatggcgggaaccc
aacgtccccgaggaccccgacgagccccgcaggcgcaagctagtcaacttatccccgctg
tcttcccaggaggcatgtggggacggtcacctgaccgtggtgtgttctgagaaacaggcc
aaggtcatcctcatgcctacccaggctgtcctgttcacacacaacgtcacagagtcttcc
ttcctcctgcgggctgacgtcgtctctgtctgcaacagcgtctgcctggcctgcttctgc
gccaacggacacgtcatgaccctcagtttgcccagtcttagactcctaatggatactaac
taccttcccctgacggacgtgcgtatcgcccgcaccttcgtcttcaccaacggcggtcag
gctctgtacctgacctctcctacagagatacagcgcatcgcatacagccaagagatgacg
gacaacctgcaggacatgctgggtgagctgttcactcctatagaaacaccagaggcccag
aacaaaggattcctcaagggcttcttcgggggcaatacccagaccttcgacagagaagag
ctgtttggggaggcagcagcaggtaaggcctctcggagcctggcccagcacatccctggt
ccaatgcgattggagaacgtgagggctgcagccggcggggtggtgggggacctggcccga
gcccgcatcgccttggagcagagaggagagagactgggagagctggaggaacgcaccacc
ctcatgttgaaaagcgcagagacgttctccacacacgcccaccaggtaatgctgaaacac
aaggacaagaaatggtatcaactttaa
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integrated database retrieval system
