KEGG   Salvelinus namaycush (lake trout): 120058197
Entry
120058197         CDS       T07522                                 
Name
(RefSeq) integrin beta-2-like
  KO
K06464  integrin beta 2
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04145  Phagosome
snh04514  Cell adhesion molecule (CAM) interaction
snh04517  IgSF CAM signaling
snh04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    120058197
   04517 IgSF CAM signaling
    120058197
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120058197
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    120058197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120058197
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120058197
   04515 Cell adhesion molecules [BR:snh04515]
    120058197
   04090 CD molecules [BR:snh04090]
    120058197
Membrane trafficking [BR:snh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    120058197
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120058197
Cell adhesion molecules [BR:snh04515]
 Integrins
  Integrin beta subunits
   120058197
CD molecules [BR:snh04090]
 Proteins
  120058197
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_integrin vWA_SIBA-E EGF_2 I-EGF_1
Other DBs
NCBI-GeneID: 120058197
NCBI-ProteinID: XP_038862614
UniProt: A0A8U1EL33
LinkDB
Position
Sna13:complement(7060062..7083094)
AA seq 777 aa
MYTCVSLLLLLMGRGVLSQEVEVCSKTVINSCSDCIRSGAYCTWCKQLNFTKPGEQEAAR
CDTRAQLEERGCKEKDIISPQNTLTVTKNTALSTDAFVKDEPIQLRPQEVNLKLRPGLPR
TFKLDFRRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFKALQGITKQGRIGFGSFVD
KTVLPFTNTNPEKLKKPCAEKEQFCQPAFGYRHVLSMTENEADFKKEVDKQRISGNLDSP
EGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDNKL
YTKSNDMDYPSVGQVATQLEKNNIQPIFAVTKNMEKVYRELSRMIPKSEVGVLSEDSKNV
VELIQAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVKVGDLVSFNVT
VTADECIDREMSFLIGPLGIKDKLKVSLSTRCECECDDPKEEEHKDCDRKGKVNCGMCSC
KAGFVGQRCECSIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYALQGGSTYYGTHC
ECENESCEKFQNKLCGGNGKCRCKNCECNPEYEGTACQCKKSDEQCRTPSGSVCSGRGTC
QCNQCKCIEGYQRPFCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQTCKSINEFEMV
ETLPPGKPCDVRDVENCRVFFTIKQLDGEDNYTAQILKTRECPELPNIYAIIGGSIAAVA
LIGLVILLIIKALFYLNDLKEFRRFENEQKKGKWMPGDNPLFMNATTTVANPTFTGE
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgtatacgtgtgtgtctctcctgctcctgctgatgggcagaggtgttctctcccaggaa
gtggaagtatgttctaaaacggtgatcaactcctgcagcgactgcatcagatcaggagcg
tactgcacgtggtgcaaacaactgaacttcaccaagccaggtgagcaagaagcagctcgc
tgtgacacccgagctcagctagaagagaggggctgcaaggaaaaagacatcatatcccct
cagaatacccttactgtgactaagaacaccgccctgtccaccgatgcatttgtcaaggac
gaacccatccagctgcgtcctcaggaggtcaatctgaagctcaggccagggctgcctcgg
acgttcaagctggactttcggagagtggagggctatcctgttgatctctactacctgatg
gatctctcctactccatggaggacgatctgaggagcatcaagactctgggaaacgagctc
tttaaagctctgcaaggcatcacaaaacaagggcgaataggcttcggctctttcgtagac
aagactgtcctgcctttcactaacaccaacccagagaagctgaagaagccatgcgccgaa
aaggagcagttctgtcaacctgcctttggctacaggcatgttcttagcatgacagagaac
gaagctgactttaaaaaggaggtagacaagcagcgcatctctgggaacttggactcccct
gaagggacgctggacgccatcatgcaggctgcagtatgtggggacaggattggctggagg
aatagtagcactcggctaatcgtcctgaccaccgatgatggcttccacatggcaggggat
ggcaagctggctggcatactggagcccaacgacgagagatgttacatggacaacaagctg
tacactaagagcaatgacatggactatccatctgttggtcaagtggctacacagttagag
aagaacaacattcaaccaatctttgctgtgacgaagaacatggagaaggtatacagggaa
ctcagtagaatgatccccaagtctgaggtgggagtattgtcagaggactccaaaaatgtt
gttgaattgatccaagctgcctacaataggctctcctccaaagtgacggtgactcatgat
gctctccctgacaatgtgagagtcacttacactccactctgtcctggagggggacccgcg
ggggacaagggggtctgtgataacgtcaaagtaggagatttggtgtctttcaacgtaaca
gtgacggcagatgaatgtatagacagggagatgtcttttctgattggcccattgggcata
aaagacaagctgaaggtgagcttgtcgactcgctgcgagtgtgaatgtgatgaccccaag
gaggaggaacacaaggactgcgacaggaagggcaaagtcaactgtggcatgtgcagttgc
aaagccggcttcgtgggtcagaggtgcgagtgctccattggggagaaggacgagagctct
ctgagggcggcatgccgaaaggacaacggcacggagtgcgaaggacgaggggactgtgtg
tgtggcatttgccagtgctatgccctacaaggtggcagcacctactacggcacgcactgc
gagtgtgaaaacgagagctgcgagaagtttcagaacaaactgtgtggagggaacgggaaa
tgccgttgtaaaaattgcgaatgcaaccccgagtacgaaggcaccgcctgccaatgcaag
aagtcggacgagcagtgtcgcacaccaagcgggagtgtgtgcagcggcaggggcacatgc
cagtgtaaccagtgcaagtgtatcgagggctaccagcggcccttctgtctgacctgtccc
gcctgccagactccctgtataaccaaggggaagtgcatcgagtgtctgggctttcagaca
ggcccgttcagtaagaactgctcccagacctgtaagagcattaatgaatttgagatggtg
gagacattgccacctggtaagccttgtgacgtgagggatgtggagaactgtcgggtgttc
tttaccattaaacagttggatggagaggacaactacaccgcccagatactaaagaccaga
gagtgtccggagttgccaaacatctacgccatcattggaggctccattgcggccgtggcc
ctgatcggcttagtgatcctgctcatcatcaaagccctcttctacttgaatgacttgaag
gagttccgcaggtttgagaatgagcagaagaaaggaaagtggatgccgggagacaatcca
ctattcatgaacgcgaccaccaccgtggctaaccccaccttcactggagaataa

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