Salvelinus namaycush (lake trout): 120058233
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Entry
120058233 CDS
T07522
Name
(RefSeq) protein TANC1-like
KO
K26456
protein TANC
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120058233
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Others
120058233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
TPR_2
TPR_11
ANK_LRRK2
TPR_14
TPR_8
Ank_KRIT1
TPR_16
TPR_9
AAA_16
NPHP3_N
TPR_19
TPR_12
ANAPC3
TPR_17
Motif
Other DBs
NCBI-GeneID:
120058233
NCBI-ProteinID:
XP_038862668
UniProt:
A0A8U1BUX8
LinkDB
All DBs
Position
Sna13:11087162..11366337
Genome browser
AA seq
1983 aa
AA seq
DB search
MFKAVLKKNRDGGKGSKKEPAGELHIAQRRCLSGGGAPQTHEPGGLHRPYSPEDVFRLSL
AKGVSMSLPSSPLLPRQSYMMPSRSSKRSPGPIRKPKYVESPRVPGDAIISELRKVADSK
TESSHYAELQAEKEPSSSSSPATQELMTRLGFLLGEGIPGTARIPMEDKNEKKCSVTSQG
ISPCSSLTSSTASPCTESPCSTLNSNASHSLRHSSSGHSKTPLTHSSPCGTIASLSSTLE
SKDSGIIATITSSSENDDRSGSSLEWSKDGSLRSSGHHGLVPSVRADTCSPVAEEDPSGP
PETPAPSRTEHPTGSSTGAAGGAAVGPSHPPEGPVPYPTAHTSLSLMMPRPNSVAATSST
KLEDLSYLDEQRNTPLRTSIRLPWHNTGGRAPQDSKARFAPYKTVDIMLKPLLFEVPSIT
TDSVFVGRDWLFQQLEDVLKGDGCEVSRGAVVVGNVGFGKTAIISRLVALSCHGGRMRQI
ASNSPSSSPKNGGDPQSTDLPLSHPPQPTPPRSATNTMRNNSCPGTPEVQRRKEEAVKRL
ATKVVAYHYCQADNTYTCLVPEFVHSIAALLCRAHQLTAYRELLLKDSYLQSMLSLRSCV
QDPMAAFRRGVLEPLANLHKERKIPEEDHIILIDGLNEAEFHKPDYGDTIASFITKIISK
FPSWLKLVVTVRVNLLEVTSLLPFSKISLDDFPENKEINTDLNAYIQYRINGSKDIMNNI
SLNGKADPIIVGKVSSHLIARSQGSYLYLKLTLDLFERGHLVIKSASYKVVPVSLAELYL
LQCNMKFMTQSAFERSLPILNVALASLHPMMDEQLFQAINAGAVRGELPWDDFQQHMETL
SCFLIKRRDKTRMFCHPSFREWLVWRADGESTNFLCDPRSGHALMAFMLSRQEGKLNRQQ
TMELGHHILKAHIFKGLSKKTGVSSSVLQALWISCSADGLSAALASLRNLYTPNVKVSRL
LMLGGANVNYRTEVLNNGPVLCVQSHLGHQEMAGLLLEFGATLDVVSENGMSPLCFASAA
GHLGLVSLLCKRGAKVDHVDKSGQCALVHAALRGHPGIIQYLLELEWTPEGQQQNCSLKN
KALQQALIAASSMGHTQVVRGLLALNNEHAVQIDGQDTLWGETALTVSAGRGKMDVCGFL
LEQGAMVQQINRRGVSPLFCAVRQGHWQIAELLLQHGADVNISDKQGRTLLMVAACEGHL
STADFLLSKGALLTSMDKEGLTPLSWACLKGHKNVVQFLVEKGAVIDHTDKNGRTPLDLA
AFYGDASIVHYLVERGAVIEHVDYSGMRPLDRAIGCRNTSVVVTLLKKGAKLGNAAWAMA
TSKPDILIILLQKLMEEGNLLYKKGKMKEAAQRYQYALRKFPREGFGDDLKAFKELRVSL
YLNLSRCRRKTNDFGLAEEFATKALELKPKSYEAYYARARAKRSSRQFTAAMADLHEAAR
LCPNNREIRRLLARVEEECKQMQRCTTQGKPQGATSSSNQAPANHDSEHKHEEGEEEEVS
GHSMAVRGLDGQNTLGMNDVEGEGTFQSQHSDRRGERVEPWTQNIYSINRTVPDTLSLTT
QQQSTRPDSPPSGPSGPGRLSHHHYPPREPREPTKQAQIVKTNQHMSSLQAGGRSSGAKS
QYAPSSPLPSRHMSSMLKPGGLGIDISPLPPPPDEPVYGEQRLSMAPASQNMAMGHHCER
DSESLHSAQASYSSQDRLSAHSVSSLDALTSGSPQDPLNAAGPGQERRKECGGNGVSQGG
DGNIRVSSSTSSLASSSSLSESSKLQGPDVRTKTTTDKAKQGQGGTSEWKPRPFMGIMDK
KARFLQQQQQMQRELLQQEQLQREQLQREQLQRQQLQRQQLQQQQHQGLQNHPGLQPTTG
ALCSWQSHSSEGLVSHTMSAMGLQAAGVNCELPYAKIGSTYHEQLKAPSQGAMGSLQNGM
YSKEFAEKLCQASTCYKESKPALAMPSHTFVDSKPKQPSLVRENPAIHVASMKPKRSFIE
SNV
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcagtgctgaagaagaacagagacggagggaaggggagcaagaaggaacca
gcgggtgagctccacattgcacagcgaaggtgcctgtccggtggcggtgccccccagaca
catgagcctggaggcctccaccgcccctactccccagaggatgtgttcagactgagcctg
gccaagggcgtgtccatgtctctgccctcctcacccttgctgcctcgccagtcctacatg
atgccctcgcgctctagcaagagatccccaggtccaatcaggaagcccaagtatgtggag
agccctcgtgttcctggagatgccattatctcagagctgaggaaggtggctgatagcaag
acagagtcctctcactatgcagagcttcaagccgagaaagagccaagctcctcctcctcc
cctgccactcaggagctgatgacaaggctgggcttcttactgggagaagggatcccaggc
acggctcgcatacctatggaagacaagaatgaaaagaagtgttcagtgactagtcagggt
atcagtccctgctccagtctgaccagtagcacggcgtccccctgcacagagagcccctgc
tccaccctgaacagcaacgccagccacagcctcagacacagcagcagcggtcacagcaaa
actcctctgactcactccagcccctgtggaaccatcgccagcctcagctccacgctcgag
agcaaggacagcgggatcatagccaccatcacaagctcctcggagaatgacgaccgcagc
ggctccagcctggaatggagtaaagatggcagcctgaggagcagcgggcaccatggcctg
gtgcccagcgtgcgggccgatacatgctctcctgtggcggaggaagaccccagtgggccc
ccagagacccctgccccatccaggacagagcaccccacaggctcctcaacgggggctgca
ggaggagcagcagtaggaccaagccacccaccagagggccccgttccataccccacagca
cacacctccttgtccctcatgatgccgcggcccaactctgttgcagccaccagttccacc
aagctggaagacctgagctatcttgatgaacagcgtaatactcccctgcggacatccatt
cggctgccctggcataacacaggtgggagggcaccacaagactccaaagcacgcttcgct
ccctacaagacggtggacatcatgctcaagccgctgctgttcgaggtgcccagcatcacc
acagactctgtgtttgtgggccgcgattggctcttccagcagctggaggacgttctgaag
ggtgacggttgcgaggtgagccgcggagccgtggttgtgggcaatgtgggcttcggcaag
acggccatcatctcccgcctggtggcgctcagctgtcacggtgggcgcatgcggcagatc
gcctctaacagccccagctcatcgcccaaaaatggtggggacccccagagcaccgacctc
cccctcagccatccccctcagcctacccctccacgcagcgccaccaacaccatgcggaac
aacagctgtcccggcacccctgaggtccagagacgcaaggaggaggccgtcaaacgcctg
gccaccaaggtggttgcatatcactactgccaggctgacaacacctacacctgcctggtc
ccagagtttgtgcacagtatcgctgccctgctgtgcagagcgcaccagctcaccgcctat
agagagctgttgctgaaggattcctatctacagagcatgctcagtctgcgctcctgcgtc
caggacccaatggcagccttccgcaggggcgtgttggagccgctggccaacctccacaag
gagaggaagattccagaagaagaccatatcatactgatagacgggctaaacgaggcagag
ttccacaagcccgactacggagacaccattgcctccttcatcaccaagataatctccaag
ttcccctcctggctcaaactggttgttactgtccgagtcaacctactggaagtcaccagc
ctcctccccttctccaagatctccctggacgatttcccagagaacaaggaaatcaacacg
gacctcaatgcctacatccagtaccgcatcaacggcagcaaagacatcatgaacaacatc
tccctcaatggcaaggccgaccccatcattgtgggcaaggtgagcagccacctgatcgcc
cgcagccagggctcctatctgtacctcaaactgaccctggacctgttcgagaggggccac
ctggtgatcaagagcgctagttacaaggtagtgcccgtgtcgctggccgagctctacctg
ctgcagtgcaacatgaagttcatgactcagtcggcgttcgagcgctcgctgcccatcctg
aatgtagcgctggcgtctctccacccgatgatggatgagcagctgttccaggccatcaac
gcgggtgccgtgcgcggtgagctgccctgggacgacttccagcagcacatggagacgttg
tcctgtttcctcatcaagcggcgggacaagacgcgcatgttctgccacccatccttcaga
gagtggttggtgtggcgggcagacggagagagcaccaacttcctctgtgaccccaggagt
ggacacgcactcatggccttcatgctgtcgcgacaagaggggaaactgaaccggcagcag
accatggagctgggccaccatatccttaaagcacacatcttcaagggtctgagtaagaag
acgggtgtgtcttccagcgtgctgcaggccctctggatcagctgcagcgctgacggcctc
tctgcagccctggcctctctgaggaacctctacacccctaacgtcaaggtgagtcgtctg
ctgatgctaggcggggccaatgtgaactacaggacagaggtgctgaacaacggcccggtg
ctgtgtgtccagtcccacctgggccaccaggagatggccggcctgctgctggagttcggg
gctaccttggacgtggtgtccgagaacggcatgagccctctctgcttcgcctcagctgcc
ggacacctgggtttagtcagcctgctctgcaagagaggagccaaggttgaccatgtggat
aagagcggtcagtgtgctctggtccatgctgctctgaggggccaccctggcatcatccag
tacctcttggagctggagtggacccccgagggccagcagcagaactgcagtctgaagaac
aaggccctccagcaggctctgatcgctgcctccagcatgggacacacacaggttgtgaga
ggcttgttggcgttgaataacgagcacgctgtgcaaattgatggccaagacacactgtgg
ggagaaaccgctctgacagtgtcggcgggcagggggaagatggacgtgtgtggcttcctg
ctggagcagggggccatggtgcagcaaatcaaccgcaggggggtctcacctctcttctgt
gctgtcagacagggacactggcagattgcagagctgctgctgcagcatggtgctgacgtg
aacatcagtgacaaacagggacggacactactcatggtggcggcgtgcgagggccacctg
agcacggccgactttctgctgtcaaagggtgcgttgttgacgtcgatggacaaggaaggg
ttaacgcccctgagctgggcgtgtttgaaaggacataagaacgttgtgcagtttctggtg
gagaagggcgcggtcatagaccacacggacaagaatggacggactccactggacctggcc
gccttctacggcgacgcgtcgatcgtccattacctggtggagagaggagcggtgatagag
catgtggactacagtggcatgaggccgttggaccgggcgatcgggtgtcggaacacatcg
gtagtggtgaccctgctgaagaagggggctaaactggggaatgcagcctgggctatggcc
acatccaagcctgatatcctcatcattctcctgcagaagcttatggaggagggcaacctg
ctttacaagaagggaaagatgaaagaggcagcccagaggtaccagtatgctctgaggaag
ttccccagggaagggtttggcgatgacctgaaggccttcaaagagctgagggtgtctctg
taccttaacctctcccgctgtcgcaggaaaaccaacgactttggcttggcagaggagttt
gcgacaaaggccctggagctgaaacccaaatcgtacgaggcctattacgcccgcgcccga
gccaagaggagcagcaggcagttcacggcagccatggctgacctgcacgaagcagccagg
ctgtgtcccaacaaccgggaaatccggcggctgctggcccgtgtagaggaggagtgtaag
cagatgcagcgctgcaccacccagggcaaaccgcagggggccacgtcctcgtcaaaccag
gccccggccaaccacgactctgaacacaaacacgaggaaggggaagaggaggaggtgtcg
gggcatagcatggccgtcagaggtctggatggacagaacactctggggatgaatgacgta
gaaggggagggaacttttcagtctcaacactcagacaggagaggagagagagttgagccc
tggacacagaacatctactccatcaatagaactgtgcctgacaccctcagcctcaccacc
cagcagcagagtaccaggcctgactctcccccctccggcccctcaggccctggcaggctg
agtcaccaccactaccctccccgggagcccagagagcccaccaagcaggcccaaatagtc
aaaaccaaccagcacatgagctccctgcaggcaggaggccgctcctcgggggccaagtcc
cagtacgccccctccagccccctgcccagccgacacatgtccagcatgctgaagccaggg
ggtctgggcatagacatcagccctctaccgccccctcctgacgagcccgtctacggggag
caacgcctgtccatggctcctgcctcccagaacatggctatgggccaccactgcgaaagg
gacagcgaatccctgcactctgcccaggcctcctactcctcccaggaccgtctgtctgct
cactcggtgtcctccctggacgctctgacctcagggtctccccaggaccccctcaatgct
gcagggccaggccaggagcggcggaaggagtgtgggggtaacggggtctcccagggggga
gacggcaacatcagggtgtccagctccaccagctccctggcctccagcagtagtctgtcg
gagagcagcaagctgcagggccctgacgtacgcaccaagaccaccacagacaaggccaag
cagggccagggaggcacaagcgagtggaaacccaggcccttcatgggcatcatggacaag
aaggcacgctttcttcagcagcagcagcaaatgcagcgggaactactgcagcaggaacaa
ctgcagcgagaacaactgcagcgagaacaactgcagcggcaacaactgcagcggcaacaa
ctgcagcagcaacaacaccaagggctccagaaccacccaggcctacagcccaccaccgga
gccctctgcagctggcagagtcactcctctgagggattagtgtcccacaccatgtctgcc
atgggcctccaggcagcaggggtgaactgtgagctaccttatgccaaaatagggagcact
taccacgagcagctcaaagctccatctcagggtgctatggggagcctgcagaatggaatg
tactcaaaggaatttgcagagaagttgtgccaagcatccacctgttacaaggaatccaag
ccagctctggcaatgccgtcgcacacgtttgtggacagtaagcccaagcagccaagctta
gtccgagagaatcccgccattcacgtagcttcaatgaaaccaaagcgatcattcatagag
tcaaatgtgtag
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