Salvelinus namaycush (lake trout): 120058300
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Entry
120058300 CDS
T07522
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K23219
methyl-CpG-binding domain protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120058300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120058300
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120058300
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120058300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
120058300
NCBI-ProteinID:
XP_038862784
UniProt:
A0A8U1C5X3
LinkDB
All DBs
Position
Sna13:17088388..17143503
Genome browser
AA seq
1386 aa
AA seq
DB search
MNRTKEGLCAEGKPPPAEVPIGWQRRITHSGVVYISPSGLVLACLEQVKSYLLTDGTCKC
GLECPLIIHKIFNFDTGAAVKQRTAEDARADANVTKLCIHKRKVITVATLHRSMESPHPA
LASQGVGTGAAAMGPLSHQAIRNNMHNGPPNSVALDGRNPNKTGMSVSGQQYYNHELGSP
PQRDLYLGYSRTRLGGSEHSSQQRSPYHSRHRVLLSPSSSTSCCSQHYGDRVPSPRTEPL
GSPDPNMLGFHGACSPGSVHMNGDRFTRLSPPSILHHGSPSASQPSCAMSGRTNVPNSPA
VNAKSLNMQKPSCSFPHDFQHKPQPACHPQSHFSLSQLPPCILQKKQVTSEKDPLGILDP
IPSNAPSQGPLVPNISGLQHNAHSQVPPMNVNIPPASVPLPSNLPLPTGKSGPVGHGHRV
QHHPTLSSASSSPIMSPAHMAGPVLAKVESPHRSRCLSSSSEHGSFAHPTGLQVPCGVSK
PLPRSSQASSGSPRPAMPRSSAYKMDKLHHLNDTPNQLPGGMNIGLSRHPNSMYRPAPGS
DSILQKNHSVGMPLNQMLDQQNPASFPASSLLSAAAKAQLVNQNKHTDSTLDANAEARSG
SSLGHPGLVGGGRGRNLDGHSTLNQRYLPNPGPLASEFQSGRAALRDKLMGMVQQREANR
KRKLSSDGSSGGINNDGAFDVLKHPMGGSGSSSSSFPETLRRMLQQGCLPPNTSMAQLLQ
SMSHQSAHNGPSHVGQSPARSGKSPFLEEALPPMSTLQQSLQGHHIQGRAKIRGFQNMNS
EGQISGQDLNMEQFNRPINQMQDPALTGNFEVLGYNGGQHAAMGSMQGNPNPHQQQQFGL
YQKPSQAQGNPQIRGRAGLPPMMSNGGVQALSESGEVSSSLSCELRQAREESLQSLIRNS
QAHTLQQQRQQPLVQGQHQGLSQGPGKHSIQGQLQHRFQCQGSHPDAPRPDDASSNPMNS
LLQSFQVDLPEMIPLPNRTMMSRPGMMSMSQPGAPCLQEGHQEYQAAQDLSGGGGEVIDT
IHRAAMGTASKSTFNVITSTGASGTFAASVFGEPVDLSHAVNSVIHGPLRSYQEPVPEPR
HQPKVGRPRKKTPDRNNSFSPVAMEAPARFHSPRHGAQRRQWDGQAEGQEQAGLWRNDKL
LQPLSLAQSRNGTYPERPKSQAQVHLGPQDQTTLHFPSHLYAHMNGNGRFLTSGRLHSRH
PGLSPGSSSVPPEGLFTKDYSHYNEHLNGQLNGNHYNGHYNGHLNGSLSGEEDLRPGDSP
SSSEGLPLHHKPRTPAHYPGDLLWGQGKGFPPWPGKIGSEGHMYSPGMVNDMQGKVESEK
IQRTLTEDLDTLHKANKITRNGRKWNNHLEAAIQEAMCELDKMTGNISQRDRQVKTTKPK
RRKISR
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaacaaaggaggggctgtgtgctgaggggaagccgcccccggctgaagtccct
ataggttggcagcgcagaatcacccacagcggggttgtctacataagtcccagtggctta
gtcctagcctgtctggagcaggtgaagagctacctgctgactgatggcacctgtaagtgt
ggcctggagtgtcctctcatcattcataagatattcaactttgacaccggggcggctgtc
aagcagaggactgctgaggatgccagagccgatgcgaatgtcaccaagctgtgtatccac
aagaggaaggtcatcaccgtggcaaccctgcacaggagcatggagtcaccacaccccgct
ctggccagtcagggtgttggcactggcgctgcagctatgggtcctttgagtcatcaagca
ataaggaacaatatgcacaatggtccacccaactctgtggctcttgatggcaggaatccc
aacaagacaggaatgtcagtttctggtcaacagtactataaccatgaactgggttctccc
cctcagagggatctgtacttggggtacagcaggacaaggctggggggcagcgaacacagt
agccaacaacgatcaccctatcacagccgccaccgtgtcctgctcagcccctcctcctcc
acctcatgttgctcacagcattatggtgatagggttccctccccaaggactgaacctctg
gggagtcctgaccccaatatgcttggttttcatggagcttgcagcccaggctctgtccat
atgaacggtgatcgttttacccgtctctcaccacccagtatcctgcaccacggctcgcct
tcggcctcccagccctcgtgtgccatgtcaggaaggactaatgtaccaaattcccctgcc
gtcaatgccaaaagcctcaatatgcagaagccctcctgcagcttcccccacgactttcaa
cacaagccccagcctgcatgccacccacagtcgcacttttccctgtctcagctccctccc
tgcatcctgcaaaaaaagcaggtgacctctgagaaggaccctcttggtatcctggaccca
attccaagcaatgctcctagccagggtcccttagtgccaaacatatctggcctccaacac
aatgcccactctcaggtaccaccaatgaatgtaaacatcccccctgccagtgtccctttg
cccagcaacctgcccttgccaactgggaagtctggacctgttgggcatggccatagggtc
cagcaccaccctaccctgtcatccgcctcatcctcacctatcatgtccccagcacatatg
gctgggcctgtcctcgccaaggtggagtcaccccaccgctcacgttgcttatccagttct
tctgaacatggtagcttcgctcaccccacggggctccaggttccttgtggggtttcaaag
ccacttccccggtcttctcaggcctcatcggggtcccctcgacctgcaatgccacgaagt
tctgcatataagatggacaaactccatcacttgaacgatacccccaaccaactgccaggg
gggatgaacattggtctaagcaggcatcccaactccatgtaccgtccagctcccggatct
gatagtatccttcaaaagaatcactcggtaggtatgccccttaaccagatgttagatcag
cagaatcctgcttccttcccagcaagtagtctactttcagcagcagcgaaagcacagcta
gtaaatcaaaacaaacataccgacagcacattggatgcaaacgcagaggctcgcagtggc
agcagtttgggacacccagggctagttggtggaggcagaggtcggaacctagatggacac
agcactttaaaccagagatatctacctaatcctgggccgttggcgagtgaatttcaaagc
ggaagagcagcactaagagacaaactcatgggtatggttcagcagagagaggcaaatcgc
aagcgcaaactgtccagtgatggcagcagtggtggcatcaacaatgacggggctttcgac
gtgctcaagcatccgatgggtggctctggatctagttcatctagctttccagagacattg
aggagaatgttgcagcagggttgtttgcccccaaacacctccatggcccagctactccag
tccatgagccaccaaagtgcccacaatgggccaagccacgtgggccaaagcccggccaga
tctggcaaatctcccttcttggaggaagctttgcctccgatgtcgactttgcagcagagc
ttgcaggggcatcatatccagggcagagcgaagatccgtggcttccagaacatgaacagt
gaaggtcagatttcaggccaggatctaaacatggagcagttcaacaggccaataaaccaa
atgcaggaccccgccttaactggaaactttgaggtgttgggttacaatggtggacaacat
gcagccatggggtcgatgcagggaaacccaaaccctcaccaacagcagcagtttggactt
tatcagaaaccatcccaggcgcaaggcaacccccaaatcagaggcagggcaggattgcct
cccatgatgtccaatggcggggtccaagccctctctgagtcaggtgaggtcagtagttct
ctgagctgtgagctgaggcaggcccgagaggagagtcttcagtctctcatcaggaacagc
caggcccatacactgcaacaacagagacagcaaccacttgttcagggccaacatcagggt
ctgtcccagggtccgggtaagcactccatacagggccagctgcagcacagattccagtgc
caaggctcccaccctgatgcccctcgccctgatgatgcctcctccaaccccatgaacagc
ctccttcagagcttccaggtggatttgcctgagatgattccactgccaaacagaactatg
atgagtcgaccggggatgatgtccatgtcccaacccggtgccccttgtctccaggagggt
catcaagaataccaggctgcccaggacctttcaggtggtgggggagaagttattgatacc
atccacagggcagcgatgggcacggccagcaagagcacgtttaatgtcatcacatcaaca
ggtgctagcggtaccttcgctgcttctgttttcggcgagcctgtcgacctctcccatgcg
gttaactctgtcattcatggcccccttcgctcatatcaggagccagtgccagagccccga
caccaacccaaggtgggtcggccacgcaagaagacacctgacaggaacaacagcttctcc
cctgttgctatggaagctcctgccagattccactcgccgcgacacggagcccagagaaga
caatgggatgggcaggcggagggccaggagcaggctggtctgtggcgtaatgacaagctc
ctccaaccgctttccttagcccagagcagaaacggcacctacccagagaggcccaaaagt
caggcccaggtgcacttaggccctcaggatcaaacaacactgcacttccccagtcacttg
tatgcccatatgaacggcaacggtaggttcctcacctcgggaagactacattccagacac
cccggcctgtcccctggttcttcctctgtcccaccagagggcctttttaccaaggattac
agccactacaacgaacatctgaacggccaactcaatgggaaccactacaatgggcattac
aatgggcacctgaacgggagcctgagcggcgaggaagacctgaggcctggggactctccc
tcctccagtgaggggctcccgctccaccacaagcccagaactccggcccactacccggga
gatctactctggggccagggcaaaggcttccctccatggccaggcaagattgggagcgag
gggcacatgtactcccctgggatggtgaatgacatgcagggaaaggtagagtcagagaag
atccagaggacactaacagaggatctggacacactacataaagcaaacaagataactaga
aatggtcgaaaatggaataaccacctagaggctgctatacaggaggctatgtgtgagctg
gataagatgacaggcaatatatcacagagagacagacaagtcaagaccactaaacccaag
aggaggaagatctccagatga
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integrated database retrieval system
