Salvelinus namaycush (lake trout): 120058323
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Entry
120058323 CDS
T07522
Name
(RefSeq) CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120058323
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120058323
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120058323
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120058323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_DAAF5
Sec7-like_HUS
Dopey_N
ParcG
MMS19_N
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
120058323
NCBI-ProteinID:
XP_038862833
UniProt:
A0A8U1BV78
LinkDB
All DBs
Position
Sna13:complement(21447587..21533981)
Genome browser
AA seq
1505 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAAVSVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLLAGALEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSMLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNSGGSLQRSRS
DIDVNAAASAKSRLITVPSASPFSSAAALPPGSYASLGRVRTRRTSSGNAVGASATVTDS
RGRSRAKIMSQSQRSRSANPTGAGSRSSSPGKLLGHSSGYGRISRPPATSSTPADKRSKV
PRSQGCSRDSSPNRLGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFKPLDRFGLIHQ
ARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASS
ACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVE
LKRLCEIFTRMFADPHSKRVFSMFLETLVDFILVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQKALDITRESFPFEQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTD
FVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGA
TKLLHNHLKNSSNTSSVSSPSNTIGRTPPRHTPSRTSPLTSPTNCSHGGLSPSMLEYDTE
NMNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPRGKRDDAVGREGVASSPGSDARLGLDVV
EGGRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDTITSSYDKSALKEAVFDDDVEQF
RDCSQDHSDLVADLLKELSNHNERVDERKGALVELLKITREDSLAVWDEHFKTILLLLLE
TLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAAST
LAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGY
DNTESSVRKASVFCLVAIYSVIGEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSD
VSSHS
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtcttgcccaggtggtgcagaaagacctagggcggaag
gtgcaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacagctctggacaggatggtggatggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaaaatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggaccttagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agcagatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgatgaggactctgtggacgggggtcggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgcggtttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagatatg
gaggacaatctctccaaggttcgggaggttctatctgacgacaaaaacgactgggagcac
agagttgtcgccctgaagaaggttcgttctctgctcctggctggagcgctggagtatgat
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcagctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccatgttgctgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
agaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcagaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaactccggcggttctcttcagcgttcccgtagt
gatatcgacgtgaacgccgcggccagcgccaagtcacgcctgatcaccgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactaggccgtgtg
cgtacgaggagaacaagctccggcaatgccgtcggagccagcgctactgtgactgacagc
agggggcgcagccgagccaaaattatgtcccagtcccagcgatccagatctgctaacccc
actggggctggcagtcgctccagttcccctggcaagctgctgggccactcgtctgggtac
gggaggatcagcaggccccccgcaacctccagcacccctgcagataagaggagcaaggtc
ccccgcagccagggctgcagtagagattcctcgcctaacagactgggcctagcaaggagc
cgtataccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagc
cgagacaccagccctgctcggggcttcaagcctcttgaccgatttggtttgatccaccag
gcccgcatttctgcctcggtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctattctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccgaaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctgaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccagaatgtttgcagatccacacagcaagagagtg
ttcagtatgtttctagagactctggtagactttatcctggtgcacagagaggacctgcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggtgctgacctgctgggg
tctgtccaggccaaggttcagaaggctctggacatcaccagggagtcttttccgtttgag
cagcagtttaacatcctgatgaggttcattgtggatcagacacagacacccaacctcaag
gtgaaggtggccatcctgaagtacatagagtcactgggaagacagatggatcctacagac
tttgtcaactccagtgaaacgcgactggctgtatctcgcatcattacgtggaccacagaa
cccaagagctctgacgtcaggaaggcggcacaggtggtgctgatctctctgtttgagctg
aacaccccggagttcaccatgctgctgggagccctgcccaagaccttccaggacggggcc
accaagctgctccacaaccacctcaagaactccagcaacaccagcagcgtgagttctccc
agcaacactattgggcggaccccaccccgccacacccccagccggaccagccccctcacc
tctccgaccaactgctcccacggtgggctgtctccgagtatgttggagtatgacacagag
aacatgaactctgatgagatctacagctccctgcgaggggtcacagaggccatccagagt
ttcagctatcgcagccaggaggacctcaacgaaccaagagggaagagggacgatgctgtg
gggcgtgaaggtgtggcgtcctccccaggctcagatgcccgtttggggctggatgtggtg
gagggtgggcgtacggccttggataacaagacctccctcctcaacactccgtctccccgc
tccttctccgggccgcgggccagggagttcgccccctacgggtatggggacaccatcacc
tcatcctacgacaagagtgccctaaaggaggccgtgttcgacgatgacgtggaacagttc
agagactgctcccaggaccactcagaccttgtggcagatcttctgaaggagctgtccaat
cacaatgagcgtgtggatgagcgtaagggggccttggtggagctgctgaagatcacacga
gaggacagcctggccgtgtgggacgaacacttcaagaccatcctcctactgcttctggag
acactgggggataaagaccacaccatccgggccctggctctgcgggtactgaaggagatc
ctgagaaaccaaccggcccgcttcaagaactatgctgaactcaccatcatgaagaccctg
gaggcacacaaagactcccacaaggaggtggtgcgggcagcggaggaggctgcctccacc
ctagccggctccatccacccagagcagtgtatcaaggtgctgtgtcctatcgtccagacg
gctgactaccccatcaacctggctgccatcaagatgcagaccaaggtgatagaacgcatc
accaaggagtccctccaccagctgctgcctgatatcataccaggactactgcagggctat
gacaacacggagagtagtgttcgcaaggccagtgtgttctgtctggtggccatctactcc
gtgattggagaagagctcaaaccacacctgcagctactcacaggcagcaagatgaagctg
ctgaacttgtacatcaagagggcccagacgaccaacagcaacagcagcagttcctcggat
gtgtcctcacacagctag
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integrated database retrieval system