Salvelinus namaycush (lake trout): 120058381
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Entry
120058381 CDS
T07522
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00020
Citrate cycle (TCA cycle)
snh00640
Propanoate metabolism
snh01100
Metabolic pathways
snh01200
Carbon metabolism
Module
snh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120058381
00640 Propanoate metabolism
120058381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120058381
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
120058381
6.2.1.5 succinate---CoA ligase (ADP-forming)
120058381
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120058381
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
CPSase_L_D2
PlyCA_N
Motif
Other DBs
NCBI-GeneID:
120058381
NCBI-ProteinID:
XP_038862932
UniProt:
A0A8U1EU31
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Position
Sna13:26484683..26501460
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AA seq
462 aa
AA seq
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MAASLICGRFSASLRNSGARSTLTTASKVLGGSSGLLGPQQQSPHLQQQRNLSLHEYMSI
GLLKEAGVCVPEGKVASSPDEAYSVAKEIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVKI
VYSPEEARDISSQMIGRKLYTKQTGEQGRICNQVFICERRYPRREYYFAITMERSFQGPV
LIGSSQGGVNIEDVAAENPDAIVKEPIDIMDGIKMEQAVSIATKMGFPAALIDDAAANII
KLYNVFMKYDASMLEINPMVEDASGQVMCMDAKINFDSNAAYRQKKVFDMQDWTQEDARD
RQAAKADLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAHQVMEAF
KLITSDRKVQAILVNIFGGIMRCDIIAQGIIMAVTDLDLKIPIVVRLQGSRVDDAKALIA
ASPLKLLACDDLDEAARMVVKLSEIVSLAQEAHVDISFQLPL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccctgatttgtggccgattttcggctagcctgagaaattctggggccaga
tcgacacttaccactgcatccaaggtgctgggtggttcctctggcctgcttgggcctcag
cagcagtccccccacctgcagcagcagaggaacctctccctgcatgagtacatgagcatc
ggtctgctcaaagaggctggcgtctgtgtgcccgagggcaaggtggccagctcacccgat
gaggcctactctgttgccaaggagattggcaccaaggatctggtggtgaaggcccaggtg
ttggctggaggccgaggcaaaggcacattcgagggagggctgaagggaggcgtgaagatt
gtttactcgccagaggaggcccgggacatctcctctcagatgattggccgtaagctgtac
accaagcagacaggcgagcagggccgtatctgtaaccaggtgttcatctgtgagcgcagg
tacccccgtagggagtactactttgccatcaccatggagagatccttccagggccccgtg
ttgattggcagctctcaggggggtgtgaacattgaggatgtggcggcagagaatcccgac
gccattgtgaaggagccaatcgacatcatggatggaatcaagatggaacaggctgtttcg
attgccacgaagatgggcttccctgctgctctgatcgacgacgcagcggctaacataatc
aagctgtacaacgtcttcatgaagtacgatgcctccatgctggagatcaaccccatggtg
gaggacgcctctggccaggtgatgtgcatggacgccaagatcaactttgactccaacgcg
gcgtatcgccagaagaaggtgtttgacatgcaggactggacccaggaggatgccagggac
cgacaggcagccaaggctgacctcaactacatcggactggacggatccatcggctgtctg
gtaaacggggctggtcttgccatggccaccatggacatcatcaagctgcatggtggcacg
cccgccaacttcctggatgtggggggcggagctacagcccaccaggtgatggaggccttc
aaacttatcacctccgacaggaaggtgcaggccatcctggtgaacatcttcggtggcatc
atgaggtgtgacatcattgctcagggcatcatcatggctgttacagacttggacctgaag
atccccattgtggtacgattacaaggatctagagtggacgatgccaaagctttgatcgct
gctagcccactgaagctcctggcctgtgacgatctggacgaggccgctagaatggttgta
aagctttctgagattgtgtcgttggctcaggaggctcatgtggacatctccttccagctg
ccactctaa
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