Salvelinus namaycush (lake trout): 120058466
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Entry
120058466 CDS
T07522
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120058466
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120058466
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120058466
Peptidases and inhibitors [BR:
snh01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120058466
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Others
120058466
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Others
120058466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
DUF3792
VSG_B
Motif
Other DBs
NCBI-GeneID:
120058466
NCBI-ProteinID:
XP_038863069
UniProt:
A0A8U1C6C3
LinkDB
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Position
Sna13:34461120..34509188
Genome browser
AA seq
759 aa
AA seq
DB search
MGERTAFLLLWVATLTLASEVPSDDSVGLLAEPQVAMFCGKFNMHVNVQSGKWESDPFGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKKGRKECSSHTHIVVPY
RCLVGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCG
IDRFRGVEFVCCPAETQRESDSVELTESDVWWGGAETEYTDNSMPRQADQGAVTTEEDDE
EDAFDRDEDGDGLEDDNDDDDDEDDDEDDVTGERDSGEGTSNIAMTTTTTTTTESVEEVV
REVCWARAESGPCHAILERWYFVPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSNSVLP
TTAPSPPDAVDRYLESPGDDSEHANFQQAKESLEAKHRDRMSQVMREWEEAERQAKSLPR
ADKKAVIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRHMALENYLGSLPANPP
RPRQVLGLLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLRVIDERMNQSL
GLLYKVPSVANEIQDQVSVLMQRVQSELSQQVSSLQSDGRTDGRVSYGNDALMPDQAYSS
APLDPGMGLDGLSFIHPESFNQPNTDNHVEPVDARPVPDRGLPTRPVSALKPEEFPEVRV
EKEERQSASYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVISLIMLRKKQYTSI
HHGIIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacggcatttctgctgttatgggttgcgaccttgacgctggcatctgag
gtgccttctgatgactctgtgggtctgctggcagagccccaggtagccatgttctgtggg
aaattcaacatgcatgtcaatgttcagagtggcaagtgggagtcggatcccttcggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgccaggaggtgtaccctgag
ctccagatcactaacgtggtggaggcgaaccagccagtcagcattcagagctggtgcaag
aagggacgcaagaagggacgcaaggagtgtagcagtcacacacacatcgtggtgccctac
cgctgcctggttggggagtttgtgagtgatgccctgctggttcctgataagtgcaagttc
ctgcaccaggagagaatggacatgtgtgagagccacctgcactggcacaccgtggctaaa
gagtcctgcggagaccgcaccatgaatctccatgactacgggatgctgttgccatgcggc
atcgaccgtttccgaggggtggagtttgtgtgttgcccagcggagacacagcgcgagtca
gacagtgtggagctgactgagtctgatgtgtggtggggtggagccgagactgaatatacc
gataacagcatgcctcgccaggcggatcagggggctgtcaccactgaggaggatgacgaa
gaggatgcctttgacagagatgaggacggagatggtcttgaggatgataatgatgatgat
gatgatgaagacgacgatgaggatgacgtgaccggtgaacgggacagtggtgaaggcacc
tccaacatcgccatgacaaccaccaccacgaccaccactgagtcggttgaggaagtcgtc
agagaggtgtgttgggcgcgtgctgagtcgggcccgtgccatgccattctggagcgttgg
tactttgtgccagagaagggcacctgtgcccccttcctctttggagggtgtgggggcaac
cggaataactttgactcagaggagtactgcctgtctgtctgcagcaacagtgtgttgcct
accacggccccctccccccctgacgcggtggaccgttacctggagtctcctggagacgac
agtgaacacgccaacttccagcaggccaaggagagtctggaggccaagcaccgcgacagg
atgtcccaggtgatgagagagtgggaggaagcagagagacaagccaagagtctccctcgc
gctgacaagaaggcagtcatccagcacttccaggagaaggtggaggccctggagcaggag
gcagcaggagagaggcagcagctggtggagacccacatggcccgggtggaggccctgctc
aacagccgccgccacatggccctggagaactacctcggctccctgccggccaacccaccc
aggcctcgtcaggtgcttggcctgttgaagaagtatgtccgtgcagaacagaaggacaga
caacacacgctgaaacactacgaacacgtccgcatggtggaccccaaaaaggctgctcag
atccgaccccaggtgatgacccacctgcgtgtgattgacgagaggatgaaccaatccctg
gggctgctctacaaggtgcccagcgtggccaatgaaatccaagaccaagtttctgtcctg
atgcagagggttcagtcagagctgtctcagcaagtctcatctctgcagagcgatgggagg
actgatggcagggtgagctatggaaacgatgccctgatgcccgaccaggcttacagctct
gcccctctggaccctgggatgggcctggatggactaagcttcatccacccagagagcttc
aatcagcccaacactgacaaccacgttgagcctgttgacgctcgtccagttccagataga
ggtctgcccactcggcctgtgtctgctctgaagcctgaggagttccctgaggtgcgggtg
gagaaggaggagcggcaaagcgccagctatgaagtgcatcatcaaaaactggtgttcttt
gctgaggatgtgggctccaacaagggtgccatcatcggcctgatggtgggcggggttgtc
atagcgacagtcatcgtcatctctctgattatgctgaggaagaagcagtatacctccatc
caccacggaatcatcgaggtggatgctgcagtgaccccagaggagcgtcacctgtccaag
atgcagcagaatggctatgagaaccccacctacaagttcttcgaacagatgcagaactaa
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