Salvelinus namaycush (lake trout): 120058502
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Entry
120058502 CDS
T07522
Name
(RefSeq) transcription factor Dp-1-like isoform X1
KO
K04683
transcription factor Dp-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
snh04110
Cell cycle
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120058502
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120058502
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120058502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120058502
03036 Chromosome and associated proteins [BR:
snh03036
]
120058502
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
120058502
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120058502
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
120058502
NCBI-ProteinID:
XP_038863142
UniProt:
A0A8U1EU59
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Position
Sna13:complement(37771542..37784274)
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AA seq
420 aa
AA seq
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MPTKTAAEEAEEKSALVGLMETNGELKVFIDQNRSPSKGVLSLVAVHPVSIPMAKQLLPK
TLGPSNVNIAPHMVIGTPQRPSVSSAILVNSPQTPNSQFLTQSQPADASPWSSGKRGKKG
EKNGKGLRHFSMKVCEKVQKKGVTTYNEVADELVAEFSAADNHISPNDSHVYDQKNIRRR
VYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELIL
QQIAFKNLVQRNRQTEQQANRPPPPNSLIHLPFIIINTSKKTVIDCSISNDKFEYLFNFD
NMFEIHDDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVTEMAQGPISNVYIT
GGSSTNGRRHHGQGSDSGADGPLASSSNDSHYSSSRVETPVSYMGDDDEEDDYDENDDED
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaaaacagccgccgaagaagcagaagaaaagagtgcacttgttggtctgatg
gaaaccaatggagaattgaaggttttcattgaccagaatcggagtcccagtaaaggtgtc
ctgtctctggttgctgtccatcctgtgtcaatccccatggccaaacaactgctgcctaaa
accctggggccctccaatgtcaacattgctccacacatggtgattggtacgccccagagg
cccagtgtttccagtgccatacttgtgaacagccctcaaacacccaactcccagttcctc
acacagagccagccggccgacgcgtcgccatggtcctcggggaagcgtggtaagaagggg
gagaagaatggcaagggcctgagacatttctccatgaaggtgtgtgagaaggtgcagaag
aaaggtgtgaccacctacaacgaggtggcagacgagctggtggcggagttcagcgctgca
gacaaccacatctcccccaacgactcacatgtgtacgaccagaagaacatccgacggcgt
gtgtacgacgcgctcaacgtgctcatggccatgaacatcatctctaaagagaagaaagag
atcaagtggattggtctgcctaccaactcagcccaggagtgccagaacctagaggtggag
agacaaaggcgactggagagaatcaagcagaagcagtcacaactccaagagctcatatta
cagcaaatagcctttaagaacctggtgcagcggaacagacagacggaacagcaggccaac
agacctccgccccccaactctctcatccacctccccttcatcatcatcaacaccagcaag
aagacagtcatcgactgcagcatctcaaatgacaagtttgagtacctgtttaacttcgac
aacatgtttgagatccacgacgatattgaggtgctgaagcgcatgggcatggcctgtggc
ctggaggtgggcaaatgttccccggaggacctgaaggtggcacgcagcctggtgcccaaa
gccctggagccctacgtcacagaaatggcccagggtcccatcagtaacgtctacatcact
ggaggatcctccaccaacgggcggcgccatcacggccagggcagtgacagcggtgcagat
ggtcccctggcctccagctctaatgactctcactacagcagctcccgtgttgagacccct
gtgtcgtacatgggggatgatgacgaggaggacgactacgatgagaacgacgatgaagat
taa
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