Salvelinus namaycush (lake trout): 120058566
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Entry
120058566 CDS
T07522
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120058566
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120058566
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120058566
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120058566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
120058566
NCBI-ProteinID:
XP_038863281
UniProt:
A0A8U1EVB1
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All DBs
Position
Sna13:complement(45972996..45978808)
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AA seq
990 aa
AA seq
DB search
MAPVQQEPAIQFAQRLASNEKPMRTKAIKKLRKYISVRSQKIQGGFECDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLMHNFQNTQSQFMFLETFLQTIKREWTGIDRLRIDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLHSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNMTFIDPFCKTASKTKDRILLKAICSSIFSAIVDQAPFAIEDLLKEVKATGG
GAEESDSGQASEEEVVEKEPPKGKKTAKGPLKKTTGVQTNGTVSTEEEDDDGLEDEDDDE
MLHLESDSESEMPDDAGIGPVLQFDYLSLADRLFGLARRSNTPSHNRQRLYKVVKTLRDL
SEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEESSPAKKWKGKKKDSKART
SDQTPATDASKPAETPGDSNNNKKKKKKKRRKKKKTGEVKTEEQNGVAVKSEVKTEEQNG
VAVKSEVKAEKDTTPASAPQTTDSKEAETEPSVPAKGTDTGAALLKEKAKVTAMETGVRS
GTPQDVVVGNLSSVSVMEEDQKKQSETLVPDATSSKKKNIKKSKTPAPKEEKEEVAEPER
FAPETATTNLRRRKSTKQEPAEQTTVEEVEMTLETVDKATPPKKRRRKRVKRTAETDTTQ
VDLEPDSTPAEEPPADFRIAATPLKKKKLKVAKAVEESAEGEMQPETEAGVLPADAKVEP
AYVAALTPLKKKKKHAKTEEQSVEAEGETPPKADANLTLIDAEVQMLEAATPTPLKKKKK
SSGRVAQEPETTTVEESVSAEQPTDADLDTPLKKGKKKKRKVPLVIEVEAEVNGMAGGKK
SKLSNDSKELSTPVSAKKTQKMTPKKAGAESDFITFQNHATIPTPLFFKTTKGSPSTPLS
SKKKKMCRTPKSESKKVTFGLNKNKTAEFRKTDRSLLVSPEGSSRVPFDPQQKPLFGVLK
SPEASLTKSSKKTKSTLKTTPKRPTAADFF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtacaacaagaaccagcgatccaattcgcgcaaagattggcttctaatgag
aagcccatgcgaacaaaagccatcaagaagctacgaaaatatattagtgttaggtcacag
aaaatccaaggtgggtttgaatgcgacgagttactcaaactatggaaaggactcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggc
ctgatgcataacttccagaacacccagagccagtttatgtttctggagaccttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcattgataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctccacagctccagcggagct
ccctgtggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tccgctgagctcacagcggctcagaacatgacattcattgaccctttctgcaaaacagca
tctaaaacgaaagatcggatcctgctcaaggctatctgcagcagcattttcagcgccatc
gtggaccaggctcccttcgccatcgaagacctgttgaaggaagtgaaggctacaggtgga
ggggctgaggagtccgactcgggacaggcttctgaagaggaggtggtagagaaggagccc
cccaagggcaaaaaaactgcaaagggacccctcaagaaaaccactggagtgcagaccaac
ggtactgtatcaactgaggaggaagatgatgatggtctggaggatgaagacgatgacgaa
atgcttcatttggagagtgactctgagtctgagatgccagatgacgcggggatcggacct
gttctccagtttgactaccttagcctggcggacaggctgtttgggctagccagacgcagc
aacacccctagccacaacagacagagactgtacaaagttgtcaagactctccgggatctc
agtgaaggagtctttccacaggatgagtacccagaggaggtgtcgacagatgaggatgat
gatgaaatgtttggcagcagaaagaggatgaaacggggacgaggcttcggggaggaggag
gaagagagctcaccagccaagaaatggaaaggcaagaaaaaagactccaaagcaagaact
tctgaccagactcccgcaacagatgccagcaaaccagcagagactcccggagactccaat
aacaacaagaagaagaagaagaagaagaggaggaagaagaagaagactggagaggtgaag
actgaagagcagaacggggtggcggtgaagtcagaggtgaagactgaagagcagaacggg
gtggcggtgaagtcagaggtgaaggctgagaaggacacaactcctgcttctgcaccgcag
acgacagactctaaagaagcagagactgagccctctgtcccagccaagggcaccgataca
ggagcggctctcctgaaggagaaggcaaaggtgacagccatggagacaggggtccgatca
ggaactccacaggatgtagtggtaggtaacctatcatctgtctcagtcatggaggaagac
cagaagaaacaatcagagactctggtaccagacgccacatcttccaagaagaaaaatatc
aagaagtccaaaacgcctgcaccgaaggaggagaaggaagaggtagcagaaccagaaagg
tttgcccctgagactgctactaccaaccttaggaggaggaaaagcaccaagcaggagcct
gcggagcagacaaccgtagaggaagttgaaatgacgttagaaacagtagacaaggccacc
ccaccgaagaagaggaggagaaagagggttaaacggaccgctgagacagacacaacacag
gtggaccttgaaccagactctacaccagccgaggagcctccagctgacttccgcatcgcc
gccacgcccctgaaaaagaagaaactaaaggtggccaaagctgtagaggagagcgctgag
ggtgaaatgcagccagaaactgaagcaggcgtccttcctgcagacgccaaggtggagcca
gcatatgtcgctgcattaaccccactcaagaagaagaagaaacatgccaagactgaagaa
cagagcgtggaggccgagggtgaaaccccgccgaaagcagacgcaaacctcacactgatc
gacgctgaggtacagatgctggaggccgccacacctaccccgctcaagaagaagaagaag
agctctggacgggtagcgcaggagccagagaccacgacagtggaggagagcgtttcagcg
gagcagcctacagatgctgacctggacacgcccctgaagaaagggaagaagaagaagagg
aaggtcccgctagtgatagaggtcgaggctgaggtcaacgggatggctggaggcaagaaa
tccaaactgagcaacgacagcaaagagctgtccacgccggtgagcgccaagaaaacacaa
aaaatgacgcccaagaaggcaggggcggagtctgacttcatcacgttccagaaccatgcc
accatccctactccccttttcttcaagaccaccaagggaagccccagcacaccgctatcc
agcaagaagaagaagatgtgtcggactcctaagtccgaatccaagaaggttaccttcgga
ctcaataaaaacaaaactgcagagttcaggaagactgaccgcagcctgctggtgagtccg
gaggggtcgtcccgagtgccctttgacccccagcagaagcccctgtttggggtcctgaag
tccccagaggcctctcttaccaaaagcagtaagaagaccaagagcaccctgaaaaccacc
cccaaacgccccactgcggctgacttcttctag
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