Salvelinus namaycush (lake trout): 120058627
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Entry
120058627 CDS
T07522
Name
(RefSeq) neurofascin-like
KO
K06757
neurofascin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120058627
04517 IgSF CAM signaling
120058627
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120058627
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
L1 family
120058627
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Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
Ig_5
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Ig_6
C2-set_2
Ig_4
V-set_CD47
Fn3_ROS1
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
120058627
NCBI-ProteinID:
XP_038863314
UniProt:
A0A8U1C7A0
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Position
14:17166726..17184091
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AA seq
1171 aa
AA seq
DB search
MGMLARSTLLLLLWQGLSAIDVPLEIRQPPTIIKQSLKDHVVDPRDNMVVECEAKGTPHP
IFSWRRNGKYFNVARDPQASMRRRSGTLDIYAWADPEAYEGEYQCVATNEHGTAYSNKIN
LRISRAPLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPETYWMSKFMLPIKQDRRVSMGV
NGDLYFSNVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTTRMVSEAAPTFLSPAGRS
SSQTVLQGEELLLECIAAGVPTPVITWTKDGEELDTTNMKVKNYNKLLQIPKASFENSGE
YTCTATNKIGYLEHTITVRIKAAPFWLEKPSNLVLAPEENARLVCRSDGIPRPSIRWFIN
GDTIEDATPVPNREVSGDTITFRSVTVANTGVYQCNASNQYGYLFANAYINVLHATPRIL
RPRTDLVKVIEGRRAWLDCRYFGSPVPDLRWSKYGLGNLEGNHFKVHSNGTLQIRGTRMD
DQGTYVCIVSNKEGRDENQVKLEVKESTKILKRPDNMRVLRGTDVRLECKAQHDPTVAIT
TTWLKNKQFLIIGWRLSLDESTLVITNVNRGDEGNYTCIIKTEMDKNTASARLVVMDRPD
PPTNLQLSDPFERSVRLTWTPGDSNHSPIKEYLVQYDDDDWLPFKWRNLSTYPGNLNSVI
LQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDAIPKNIQGVGTWRNNMMISWE
ALNNREWNGPHLKYLVWWKRRDSREEWKNATTWWCKYYIYDTDTFTPYEIKVQAVNDFGM
GPESTVIIGYSGEDRPTAAPLNLRVSRIEATKVTVHWDPVARSSIMGELKEYKVYFWRDS
SQLRWLSVSRAMKSKAFPASGPRLSGVLPGLIPYSNYKMYIVVANNRYEGHPSNTIEFST
PEGTPSAPRSFRIQQRHLDMIWVDWDTPAEPNGIVTGYILKYQTVNATQGEELHVEQFPP
NTTSFAVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAYAREQVDLSTQGWVIGV
MCAVALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDKDQEGSFDYRSLERISRVTT
IPYSARREEETKVGRGQTTVDTMMKRTDSDDSLVDYGDGQEIEFNEDGSFIGQYTGHKER
DDRDTEFSESRSQEAHSPMAHSPMSPIYSFA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggccagatccactctattactactgttatggcaaggactgtctgccatt
gacgtcccactggaaatcagacagccccccaccattataaaacagtcgttgaaggatcat
gtcgtggaccccagagacaacatggtcgttgagtgtgaagccaaaggcacccctcaccca
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgggaccctcaggcctcg
atgaggagacgttcggggacgctggacatctatgcctgggctgacccggaggcttatgag
ggggagtaccagtgtgttgccaccaatgagcatggcactgcatactcaaacaagatcaac
ctacgcatctctagggcccctctgtggcccagagaggtgttggaaccggtaacggtgagt
gttggtcttcctctggtcttggactgcagccctcctccaggccctcccaaacctgagacc
tattggatgagcaagttcatgctgcctatcaaacaagaccgtagagtgtctatgggggtg
aatggagatctctacttctctaatgtctacgtcaatgactctgccaccgactactgctgc
aacgcacgcttcccctacaaaaacattatccaacagaagatgcctattaccgtaagagtc
cttacaacccgcatggtgtctgaggccgctcccaccttcctgtctccagccgggaggtcc
agctcccagactgttctgcagggggaggagctgctcctcgagtgcatcgctgctggagtt
ccaacccctgtcatcacatggaccaaagatggagaggaactggacacgaccaacatgaag
gtgaagaactacaacaagttactgcagatccctaaggcctcttttgagaactctggtgaa
tacacgtgcactgccacaaacaagattggatacctggaacacaccatcactgtccggatc
aaagcggctccgttctggttggaaaagcccagtaacctggtgcttgccccagaggagaat
gcacgcttagtgtgccgctctgacggcatcccccggcccagtatccgttggttcatcaac
ggagatacaatagaggatgctactccagtcccaaacagggaggtgtcaggagacacaatt
accttccgctctgtgactgtggcgaacactggtgtttaccagtgcaatgcctctaaccag
tatggctacctgtttgccaatgcctacatcaacgtactgcatgcaacgccacgtatcctt
aggcctaggactgatctggtgaaggtcattgagggcagacgcgcctggctagactgccgc
tattttggctcgcccgtgcctgatctgcgctggtctaagtatggactgggcaacctggag
gggaatcactttaaagtacacagcaacgggacactacagatcagaggcacccgtatggat
gaccaggggacatatgtgtgtattgtcagcaacaaggaaggacgagatgaaaaccaggtc
aaactagaggtcaaagagtccaccaaaattctcaaacgcccagataatatgagagtcctc
cgggggactgatgtccggttggagtgtaaggcccaacatgaccccacggtcgccatcacc
accacctggctgaagaacaaacagttcctcatcataggctggaggctgtcgctggatgaa
tcaactctggtcatcacaaacgtcaacagaggagacgagggcaattacacctgcatcatc
aagactgagatggacaagaacactgcctccgcccgcctggtggtgatggatcgtccagac
ccccctacaaacttgcagttgtcggacccctttgagcgcagcgtcaggcttacctggacc
cctggagatagcaatcacagtcctatcaaagaatacctggtgcagtatgatgatgacgac
tggttacctttcaagtggagaaacctttccacgtaccctggaaacttgaactctgtcatt
ctgcaactgtcaccattcattatctatgaatttagggtcattgctatcaatgacattggt
atgagtaaacccagtcgctcgtcagccaacttccagactggtggagcacctccagacgcc
atccctaaaaacatccaaggagtgggaacatggagaaacaacatgatgatcagctgggag
gcactaaacaacagagagtggaacggtccccacctaaagtacttggtgtggtggaaacgg
agggattccagggaggagtggaagaacgctaccacttggtggtgtaaatactacatctat
gacacagacaccttcacaccatatgagataaaggtccaggctgtcaatgactttgggatg
ggcccagagtccactgtcatcataggctactctggagaagaccgtcccactgctgccccc
ctcaacctgcgtgtgtccaggatagaggccactaaggtcaccgtgcactgggaccccgtg
gctcgcagcagcatcatgggagaactgaaggaatacaaggtgtacttctggcgagacagt
agccagctgaggtggctgagtgtgagcagggccatgaagtctaaagcctttccagccagc
gggccgcgtctctctggtgtcctgccgggactcatcccttacagcaactacaagatgtac
atagtggtggccaacaaccgatacgagggacatcccagtaacaccatagagttctccact
ccagagggaacaccctctgctccaagatccttcagaatccagcagagacatttggacatg
atctgggtggactgggacactcctgcagagcccaatggcatcgtcaccggatacatactc
aaatatcagacagtgaacgcaactcagggggaggaattgcacgttgagcaatttccccca
aacaccaccagttttgctgttcgccgatatgatcgctacacccgctatagattcaccata
gcagcacagactagaatcggggtaggagaatggtacacagaggaatcaccccattataca
actgaagcttatgctcgggagcaggtggacctctccactcagggctgggtaattggtgtg
atgtgtgctgtggctctcttcgtgctcatcctgctggtcgtctgctttatcaaaaggagc
cgagggggcaaatacccagtacgggacaagaaagaagtgacattggagccagtggatgac
aaagatcaggagggatcatttgactatcggtctctggaaaggataagtcgtgtcaccacc
attccctactctgcccgacgggaggaagagactaaagttggcaggggccagacgacagta
gacaccatgatgaaacggacagatagtgacgacagtctggtggactatggtgatggacag
gagattgagttcaacgaggacggctccttcattggccagtacactggacacaaggagagg
gatgacagagacacagagttcagtgagagcaggagccaggaagcccactccccgatggcc
cactcccccatgagccccatctattcatttgcataa
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