Salvelinus namaycush (lake trout): 120058673
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Entry
120058673 CDS
T07522
Name
(RefSeq) biglycan-like
KO
K08118
biglycan
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120058673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120058673
Proteoglycans [BR:
snh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
120058673
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Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRRNT
LRR_14
LRR_LRWD1
LRR_5
Motif
Other DBs
NCBI-GeneID:
120058673
NCBI-ProteinID:
XP_038863349
UniProt:
A0A8U1ELP6
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Position
Sna14:complement(24039492..24042793)
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AA seq
372 aa
AA seq
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MIPFSVVLLLLCATPLPIPSVALPFEQKGFLDFGKSIDVEGLMMMMMNDEEEGSAVEEYY
KPEQPTCPFGCQCNQKVVQCSDLGSHYVPYDVPPETRLLDLQSNQIREIREDDFKGLSNL
YALVLVNNKISRVHPRAFMPLRRMQKLYFSHNQLTAVPKNLPSSLVELRIHDNHIKKVAA
GDFSGLGSMNCIEMGRNPIQNSGLEPGAFDGLKLTFLCISEAKLTGIPKDLPEGLHELHL
DQNQIQAIELEDLRQYEGLHRLGLGYNHIRHIEHGSLDYLQNLRELHLENNRIPNVPGGL
AGMKHLQVVYLHSNNISQVDMNDFCPEGFGVKKTYYNGISLFDNPINSWEVVPTTFRCVS
NRMAVQFGNHKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattcccttctctgttgtccttctcctgctgtgtgccacccctctacccatcccctct
gtggcactgccctttgagcagaagggcttcttggactttgggaagagcatcgatgtagag
gggctgatgatgatgatgatgaacgatgaagaggagggctcagcagttgaggaatactac
aaaccagaacagcctacttgcccattcggctgtcagtgtaaccagaaggttgtgcagtgc
tctgacttgggttcacactatgtgccatatgacgtccccccggagaccaggctcttggac
cttcaaagcaaccagatcagagagataagagaggatgacttcaagggtctcagcaacctc
tatgctctggtgttagtgaataacaagatctccagggtgcacccgcgggccttcatgccc
ctcagaaggatgcaaaagctctacttctcccacaaccagttgacagccgtgcccaagaac
ctgccctcctctctggtggagctccgtatccatgacaaccacatcaagaaggtggcggct
ggtgatttctctggcctgggcagcatgaattgcattgagatggggaggaatcctattcag
aacagtggtttggagccgggagcctttgatggtctcaaacttaccttcctttgcatttct
gaggcaaaactcacaggcatccctaaggatctccctgagggtctacatgagttgcatttg
gatcagaatcaaattcaagccattgaactagaagacctaaggcaatatgagggtttgcac
aggttgggtttaggctacaatcacattcgccacattgagcacggcagcctggattacctg
caaaacctgagagagctgcatctagagaacaaccggatccccaatgtccctggaggtctt
gctggaatgaagcatctgcaggtggtctaccttcactccaacaacatcagccaggttgac
atgaatgacttctgccctgagggttttggtgtgaagaagacttactacaacgggatcagt
ctctttgataacccaatcaactcctgggaggtggtgccgaccaccttccgctgtgtcagc
aacaggatggccgtacagtttggcaaccacaaaaagtag
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