Salvelinus namaycush (lake trout): 120058690
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Entry
120058690 CDS
T07522
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120058690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120058690
03036 Chromosome and associated proteins [BR:
snh03036
]
120058690
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120058690
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120058690
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120058690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Podoplanin
zf-C2H2
zf-C2H2_6
zf-C2HE
Glycophorin_A
zf-C2H2_4
zf-C2H2_ZNF462_1st
DUF4690
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120058690
NCBI-ProteinID:
XP_038863363
UniProt:
A0A8U1C627
LinkDB
All DBs
Position
Sna14:29597101..29647181
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AA seq
1523 aa
AA seq
DB search
MIKVQLLLLLALVGPLCGVAHASTLVTPVELVTDSPAVPEATKPLKEEDPIVTHAPSAEP
EAAAEDVVTDTPAAEDVVTNTPAAEDVVTDTPAGEETAATEAAATEVAPVETEAPATEAA
KQEAATTNAPAIITEAPAEPEAEATTAAEAKEEVEVEEPEEGMGSGQVVGIGIGALVAVI
VVIAVVIAVVRRMGKYSQRPNAHCRSPPASAPFTSALSLSTLGTMESFEREKMEKLWAVV
KLTSSALLLPSLCSSGVRGAAAEQELSRPAPCLHCTSCVTTLQQQCPQMQSCKRKETPSM
LITRSELRGSPTCRSLQKVAVSEDSKEKSTQLPKAMEDSHTLYISELGDDDNLEEEDKEL
EETHCSLYLMSMETDELADSNTSCQKPEAKGCDLKQDLGSVSHSTTPELPENPDHDPDTE
NRCLRQMNMENYRVVTLASIAKRFLAHIQTCDDISAGSTSAISGSKMQDGLKPSFALITE
GQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMLNVESTTDVGVSIAVNAPTSESQC
SSPACSLSSNDESEISNSPPVNDAMTTRLLPEGWSPMSGGSSCNQQPLDLSNAVKKSEDE
ALREAVLDLSVHRKSADDSEAKRILVPQPLNKKRKPNTSMLEKVLMNEYANLEVAAEHEL
SILENHDAPLGTDFAIVTASYMSPATEGEVFGLTLPSSALSPSPSSLASVTRQSISPCTI
ALASPSPHPVLPTAPSLITVLAPPTSSSSNFTNQPILQVLAPKISPKPLIICTENSLNSA
ECEWRAALPDWATSNSASQLAISKPLDPTLNIQGHVFLTDHTINQIALNTTTVDSNIGFE
VPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENLVPTTIAFQENNFESTAPAQIV
INQQQLLSLPHETVDPTILVSSLEQSVTLSTLSAVISECQESISSPVPAIIKRESNQKVV
SEDISICPSKTAPPSEGTSQVEESSNETLSKLQETFTKEFICNVCDKLFHSMKELGHHVS
EHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCTCTKEFAYLCNLKHHQKELH
PGQECKYTEEENGKLRPQNYNNSTKVSTEALSYCAMAESNKPVIKDEGELDDATEELFTT
IKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVASATNFTTHNIPQTFST
AIRCTKCGNSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHFAKAQNGVLSSTNSTN
GQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKHLVQRAISQRSKSTSLTKKTSSLVNE
EQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSISYTKENNGHLRREVLH
LEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASVQTPQEAPKLTALSLV
RPFNSPQRQGNRMQHGVKEICSNITLVKSHQQQPQVDEHPCSQSGRVRGPVTRSLQQIVV
TASAKEEQLTSQEPPRDLQDPSI
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagttcagctgctgcttctactggccctggtcggccccctctgtggcgtcgca
cacgcaagcacactggtgacaccagtagagctggtgacagattcccctgctgttcccgag
gccaccaagcccctcaaagaggaagatcccatagtcacccatgccccttcagctgaaccc
gaggctgcggccgaggatgtcgtaacggacacccctgccgccgaggatgtcgtaacgaac
accccagcggccgaggatgtcgtaacggacacccctgccggagaagaaaccgccgctact
gaggctgctgccacggaggtcgctcctgtggagaccgaagcccctgccactgaagctgcc
aagcaggaggcggccacaactaacgcccctgccatcatcaccgaggccccggcggagccc
gaagccgaggccacgacagctgcagaggctaaggaggaggtggaggtggaggaaccagag
gagggtatgggctctggacaagtggttggtattgggattggtgcattggtggcagtgatc
gttgtcatcgccgtggtgatcgccgtggtgaggagaatgggcaaatactcgcagcgtccc
aacgcccactgccgcagtccgccagcttcagccccctttacctctgctctctctctctcc
acactgggaacaatggagtcttttgagagggagaagatggagaagctatgggccgttgtg
aagctcaccagctctgctctccttctgccatcactgtgttccagcggggtccgtggtgct
gcagctgagcaggagctgagtcgcccagccccctgtctccactgcacctcgtgcgtcaca
accctccagcagcagtgtcctcagatgcagtcctgcaaacgcaaagagacaccatcgatg
ctaataacgaggtctgagctgagaggttctcccacctgccgatccctgcaaaaggttgct
gtgtcagaggactccaaagagaagagtacacagcttcccaaggccatggaagactctcac
actttatacatctcagagttgggagatgatgacaatttagaggaggaggataaggagctt
gaggaaactcactgcagtctttatttaatgtccatggaaacggatgagctggcagattca
aacacaagttgccaaaaacctgaggccaaaggctgtgacctgaagcaggatttaggatcg
gtctcccattcaacaacccctgagctcccagagaatcctgaccatgaccctgatacagag
aacaggtgtctacgtcagatgaacatggagaattacagggtggtcacacttgcaagtatt
gcaaaaaggtttttagcacacatacaaacatgcgacgacatcagcgcaggatccacgagc
gccatctccggctcaaagatgcaagatggcctcaaacccagctttgccctgatcacagaa
ggccagaagctgtgttcaccactttccctgactgtcctcccagcaggattggggaggttt
aaaagaaggacagggtctcccccaaactcaccacaacaaagccctatgttgaatgttgaa
agcacaacagatgtgggtgtttctattgctgtcaatgccccaacttcagagagccaatgc
agttcacccgcatgcagtttatccagtaatgatgagagtgagatctccaacagtccacca
gtaaacgatgcaatgacaactcgtctcttgccagagggatggtccccaatgagtgggggt
agttcctgcaaccagcaacctttggacctctcaaacgctgtcaagaaaagtgaagacgaa
gccctgcgggaagctgtgttggacttgagtgtgcacagaaagagtgcagatgattcagaa
gcaaagagaattttagttccacaacccttaaataaaaagaggaagccaaacaccagcatg
ttggagaaggtgctgatgaatgagtacgcaaacttagaggttgctgcagagcacgaatta
agtatattagaaaatcatgatgcaccattaggtacagactttgccatagttactgcttcg
tatatgtcacctgctactgaaggcgaggtgttcggattaactttgccctcttcagcactt
agtccatccccttcctctctagcttcagtcaccaggcaatcgatctcaccatgcaccata
gcacttgcttccccatctccacatccagtcttacccactgctccgtcgctaattactgtt
ttagcaccaccaacatcttcctctagcaatttcacaaatcaacctatccttcaagtattg
gcccctaagatatctcctaaacctttaataatctgcactgaaaattcattgaattcagct
gagtgtgagtggagagctgctttgccagattgggctacctctaattctgcaagccaactt
gccatctctaaaccccttgacccaactctcaatatacaagggcatgtgtttctcacagat
cacactataaatcaaatagctctgaacactaccacagttgattccaacattggatttgaa
gtgccaacatgctctccagctttaactctaaacgattcccttatcaactcctttgacatt
actagtaatactgttttaattgaatgcacagttgctcttgaaaccccagagaaccttgtc
cctaccacaattgctttccaagaaaataattttgaatccacagcacctgcgcaaattgtc
ataaatcagcagcagcttctgtccttgcctcatgaaaccgttgaccctactattttagta
tcttctttagagcaatcggttaccctttcaacactgtctgcagtcatatctgaatgtcaa
gaatccatttcctcccctgttcctgccattattaaaagggaatctaaccaaaaggtagta
tcagaggacatatctatctgcccctctaaaacagcacctccctctgagggcacaagtcaa
gtggaagaatcatcaaatgagaccctctccaagctacaagagactttcactaaggaattc
atatgcaatgtatgtgataagctttttcattcaatgaaggaactgggtcatcatgtaagt
gagcattctgatgaatggccatacaaatgtgagttctgtgtgctgctctttgggaagccc
acggcattgcttgatcacaggtcaaccctccatggcgtcggcaagagctatgtttgctgc
acatgtacaaaggaatttgcttatctttgcaacctgaaacatcatcaaaaggagttgcac
cctggccaggaatgcaaatacacagaggaagaaaatggcaagctacgaccccagaactac
aacaattcaacaaaagttagcacagaggctttgtcctactgtgccatggcggagtccaat
aaacctgtcataaaagatgagggagaattagatgacgctactgaggaactctttaccaca
ataaagataatggcttctgagggaggaaaacccaaaggcctggatgtttgtcttggcatc
aaccaacactatcccagttttaagccgcctccgtttccctatcacaaccggacacctgtt
ggctctgtagcctcagctaccaacttcaccacccacaacatcccacaaaccttcagcact
gctatccgatgcactaaatgtggcaatagctttgataacatgccagagctgcacaaacac
attcttgcctgtgcaaatgccagtgacaaaagacgctacacacccaataagaaccccatt
cctcttcgtcactttgcaaaagcccaaaatggagtactgtcctctactaattccacaaat
ggccaaaatgctctacacacggcaagtcaaacaaatcgtcccaaactcaatcaggagcca
cctgccaagttgaagcttaatgcactcaacaaaaggaaaaaacatctggtacagagggcc
atttcacagaggagtaagtctacctctttgacaaagaaaacctcttctctagtgaatgag
gagcaagagatctatgtctgtccacattgcattagagaattcacataccgccgcagccga
accaagcacatggccgtctgccccaggaaacctgctgccaaagaggccaagaaaagaaaa
gatggcagtatctcttacactaaggaaaataacggccaccttcgcagagaagtccttcat
ttggaagagaaatctgaccatgaacagaaaagcagagcccatagttctagtccaacaaag
aggacagccatattaccagctcataaagtcctgtcaaacaaaaaaagtaaagccatcatt
gcaatggcaagtgtccaaacaccgcaggaggcacccaaactgactgcactgtctcttgtt
cgccctttcaactccccacaacgtcaaggcaataggatgcagcatggtgtaaaggaaatt
tgttcaaacattacactggtgaaatcccaccaacaacaaccacaggtggatgagcacccc
tgcagtcagagtggaagggtgaggggaccagtgacccgcagtctacagcagattgtcgtc
acagcttcagcaaaggaagaacagctgaccagtcaggagccaccaagggatctgcaggat
ccttcaatttga
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integrated database retrieval system
