Salvelinus namaycush (lake trout): 120058744
Help
Entry
120058744 CDS
T07522
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120058744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120058744
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Major cadherins
120058744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
DUF5527
Motif
Other DBs
NCBI-GeneID:
120058744
NCBI-ProteinID:
XP_038863413
UniProt:
A0A8U1EQZ3
LinkDB
All DBs
Position
Sna14:38483835..38577776
Genome browser
AA seq
866 aa
AA seq
DB search
MENEGVVFQSGDARFSVGTDGSIYTQREVAGLSGPVQFTVTASGPHTHVWETTVKLAPMG
QATPSPPGNQIRVEQGKGGERKEEEGVKAPPEFQAPPTVIMFPRQREMGSKGLRRQKRDW
VIPPINVPENSRGPFPQMLVSIRSDQDRNISIRYSITGVGADQPPNEVFSIDPVAGKMFV
TKPLDRERRSSYHLRAHAVNMNGERVESPIDLYIYVIDMNDNRPEFKNQVYNGSVDEGSK
PGTFVMHLAAFDNDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREK
VSQYSIIVQATDMEGNLNFGLSNTATAIISVTDINDNPPELTSRTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWNAVYRIISGDPIGHFTIITDQHTNDGMVTVVKPVDFEQNRAFMLT
VVVNNQAPLASGIQSSLQSTSGVTISVVDINEPPYFPTNPKSIRFEEGVPAGTSLTTFSA
SDPDRFMQQSIRYSKLADPADWLSINNTNGQIITTATLDRESIYVKNNIYEATFLAVDNG
SPMASGTGTLQIYLIDVNDNAPSLLPRESQICERINRNAGINITAADTDADPNVGPFVFE
LPTFPASIRRNWTVSRLNGDYARLSLRTQYLEPGVYEVPVIVTDSGNPPLSNRSVIKVKV
CPCDENGDCTLVGAVAAAGLGTGAIIAILICIIILLSMVLVFVLWMKRREKERQTKQLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDERPIIPESQY
PIRPVVPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTVGSVSSLNSSSTGD
QDYDYLNDWGPRFKKLADMYGGGDDE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagggggtggtctttcagagcggtgacgccaggttcagcgttgggaccgat
gggtccatctacacccagagagaggtggcaggcctgagcggaccggtccagttcacggtc
actgccagcggtccacacacacacgtgtgggagacaacggtcaaactggccccgatgggg
caagccacaccctcaccgccaggcaatcagatcagagtggaacaggggaaaggaggggag
aggaaggaggaagagggggtcaaagcaccaccagagttccaggccccacccactgtcatc
atgtttcccaggcaacgggagatgggctccaagggactgcggagacagaagagagactgg
gtcattccgccaatcaacgtgcctgaaaactccagaggtcccttcccacagatgctcgtc
agcatccgttcggaccaggaccgtaacatctccatccggtacagcatcacgggggtggga
gcggaccagccacccaatgaggtgttcagtatcgaccctgttgccgggaagatgttcgtc
accaaacccctggaccgagagaggagatcatcctaccatcttcgtgcccatgcagtgaac
atgaatggtgagcgggtggagagccccatagacctgtacatttatgtcatagacatgaac
gacaaccggcctgaattcaagaaccaggtctacaacggctctgtggatgagggctccaag
ccaggtacatttgtgatgcacctggcagccttcgataacgacgacaacaccacggccaat
gggatggtgcgctaccggatcctgtcccagacgccacacagccccatccccaacatgttc
accatcaacagcgagactggagacatcgtcaccgtggcagcaggcctcgaccgcgagaaa
gtgtcccagtacagcatcatagtccaggccacggacatggagggcaacctaaactttggc
ctgtccaacacggccaccgccatcatctcggtcacagacatcaacgacaacccgccggag
ctcacttccaggactttttcaggggaggtcccagagaaccgggtcaatgtcgtggttgcc
aacctgaccgtgatcgaccgggatcagccacactcgcccaactggaatgctgtgtacagg
atcatcagcggagacccaataggtcacttcaccatcatcaccgaccaacacaccaacgac
ggcatggttaccgtagtgaagccggtggactttgagcagaacagggccttcatgctgacg
gtggtggtcaataaccaggccccgctggcaagtgggatccagtcgtccctccagtccaca
tccggggtcaccatctccgtggtagacatcaacgaaccgccctacttccccactaacccc
aagtccatccgctttgaggagggcgtccccgctggtacctctctcaccacattctcagcc
agcgaccctgaccgtttcatgcagcagagcatcaggtattctaaactggccgacccagct
gactggctgtccatcaacaacaccaacggtcagatcatcaccacggcaaccctggacaga
gagtccatctacgtcaagaacaacatttatgaagccaccttcctcgcagttgacaatggc
tctcccatggccagcggtacagggaccctccagatctatctgatagacgtgaacgacaac
gctccgtctctgctgccccgcgagtctcagatctgtgagcgcatcaaccgcaacgccggc
atcaacatcacggctgcagacacagacgcggaccccaacgtgggccctttcgtcttcgag
ctgcccacgttccctgctagcatacgacgcaactggacagtgtcacgtctcaacggtgac
tatgcccggttgagtttgcggacccagtatctggagccgggggtgtatgaggtgcctgtg
attgtgaccgactcagggaaccctcccctctccaacaggtccgttatcaaggtcaaggtg
tgtccgtgcgatgagaacggagactgcacccttgtcggggctgtggctgccgctggactt
gggactggagccatcattgccattctcatctgtatcatcatactgctcagtatggtgcta
gtgtttgtactgtggatgaagcgcagagagaaggagagacagaccaaacagctgctgatc
gacccggaggacgatgtcagagataacatcctgaaatacgacgaggagggagggggagag
gaggaccaggactatgacctgagccagctgcagcagcctgactctctggagcacatcatc
agtaagcccccgggggtacggagggtggacgagcgccccatcatccctgagtcccagtac
cccattcgaccggtggtcccccaccctggggacatcggggacttcatcaacgagggtctg
cgggcggcggacaatgaccccacggcccctccctatgactccctcctggtgtttgactac
gagggcagcggctctacggtcggctccgtcagctccctcaactcctccagcacaggggac
caggactacgactacctcaacgactggggcccccgcttcaagaagctggccgacatgtac
gggggaggggatgacgaatag
DBGET
integrated database retrieval system