Salvelinus namaycush (lake trout): 120058818
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Entry
120058818 CDS
T07522
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04672
Intestinal immune network for IgA production
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120058818
04514 Cell adhesion molecules
120058818
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120058818
09142 Cell motility
04820 Cytoskeleton in muscle cells
120058818
04810 Regulation of actin cytoskeleton
120058818
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120058818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120058818
04515 Cell adhesion molecules [BR:
snh04515
]
120058818
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120058818
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120058818
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
Integrin_b_cyt
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
120058818
NCBI-ProteinID:
XP_038863478
UniProt:
A0A8U1BW86
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Position
Sna14:complement(9473008..9480522)
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AA seq
756 aa
AA seq
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MGLDGRCLSKPTCTECLRSLGCAWCKQKGFLAQGEPNERRCDREEALRKRHCSDGQVLNP
QPAIRSRAEEPMGTVVQLEPQNLHLKLRVGMPQSFEVRFRRAEGYPIDLYYLMDLSFSMK
DDLENVRNLGLEVVTAMKNITSAVRIGFGSFVDKVVDPYVSTVEAKLANPCKEGYKGPCQ
PAFSFKHVLKLTEDVEEFERKVSKQSISSNLDGPESGFDAIMQVAVCQDDIGWGNVTRIL
VYTSDDTFHLAGDGKLAGIYHPNDGKCHLNSNGLYNKDTVYDYPSVGHLSQVLSANNIRL
IFAVTDQHIQNYEALSEMIPQSVVGLLEDDSSNVVELISEAFNNLSSYIVLEHRDVPPGL
GVSYSSHCGDDRLAQGQDRGECSDVRINQQVNFTVTVTSSSCLSKTESFIIKVQGINEEL
RVTVETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGYTGQRCECETQPNKDTSLAVEA
LCSPAQTNSTGTPLCSGRGSCVCGQCICWGQHRGQHCQCDNISCNRHNNMICGGNGRCDC
GNCGCFHNYTGPACECSTLTDQCQTSNDGICSHRGQCECNECHCHPGFFGSHCTKPLAPC
DTYRACVACMLHESAKNMCHHPCGSAKPIRINGTQSFTCQDDTVRFNVELIINTGDIFVY
YTDTPRGIDPWIINMGKAVVGIVLLGVIVIIIYRLMLEVFYQRERRRFLKDKENIWWEDT
QNPLFQEAVTTFTHPMHVLEPDADCATSTFGKIKQM
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggatggaagatgcctgtctaagcccacctgcactgagtgtctgagaagcctt
ggctgtgcctggtgtaaacagaagggtttcctggcgcaaggggagccaaacgagcgtcgc
tgtgacagggaggaggctctgagaaagagacactgctctgacggacaggtcctgaacccc
cagcctgcaatacgtagcagggcagaggagccaatggggaccgtggtccagctagagcca
cagaacctccaccttaagctaagagtcggcatgccccagtcatttgaggtgaggttcagg
cgtgcagagggttatcccatagacctgtactacctgatggacctgtctttctccatgaaa
gatgacctggagaatgttaggaacctgggactggaggtggtcactgccatgaagaacatc
accagtgctgtcaggataggctttggttcctttgtggataaggtggtggacccctacgtc
agtacagtggaggccaaactggccaacccatgcaaagaggggtacaagggcccctgccag
cctgccttcagcttcaaacatgtactgaagctcactgaggacgttgaagagtttgagagg
aaggtgagcaagcagagcatctccagtaacctagacggcccagagtcaggctttgacgcc
atcatgcaggtggctgtctgtcaggatgacattggctggggtaatgtaactcgtatcctg
gtctacacttcagacgataccttccacctggcaggtgatgggaagcttgctgggatctac
catcctaacgacgggaaatgccacctgaatagcaatgggctctataataaggacaccgtt
tatgactatccctcagttggacacctatctcaggtcctatcagccaataacatcaggctg
atctttgcagtgacagaccagcacattcaaaactatgaggcactcagtgagatgatcccc
cagtcggtggtgggcctcctggaggatgactccagcaacgttgttgagctcatctctgag
gccttcaacaacctatcgtcctacatcgtcctggagcaccgtgacgtcccaccaggcctg
ggggtctcctacagctcccactgtggtgatgacaggctagctcaggggcaggacagaggg
gagtgcagtgatgtcagaatcaatcaacaggtcaatttcacagttactgtgaccagctcg
agctgtctgtccaagacagagtctttcatcatcaaagtgcagggtatcaatgaagagctg
agggttaccgtggagacgctgtgtgactgtgactgtcaggactccgaggaacagtcatcc
cagtgtcatggcaatggaacattccactgtggtatctgtagctgtgattcaggatacaca
ggtcagcgttgtgagtgtgaaacacagccgaacaaagacaccagtctggccgtagaggcc
ctgtgttcacctgcacagacaaacagcacaggcacaccactgtgcagcggccgtgggagc
tgtgtgtgtggccaatgtatctgctggggccaacacaggggccaacactgccagtgtgac
aacattagctgcaaccgtcacaacaacatgatctgtggcggtaatgggaggtgtgactgt
ggtaactgtgggtgtttccataactacacaggccctgcatgtgaatgctctaccctcaca
gatcagtgccagaccagtaacgatggaatctgctctcaccgaggacaatgtgaatgtaat
gaatgccattgtcaccctggtttctttggcagccactgcaccaagcctctggcaccatgt
gacacataccgggcctgtgttgcttgcatgttacatgagtcagccaaaaacatgtgtcac
catccctgtggctctgccaagcctatccgcatcaatgggactcaatcattcacctgtcag
gatgatactgtacgttttaatgtggaactcatcataaatactggtgacatctttgtctac
tacacagatactccaagagggattgacccatggattataaacatggggaaggcagtggta
ggaatcgttttactgggtgtgatcgtgataataatctaccggctgatgttagaagtgttc
taccagcgggagcgtagaaggttcctgaaggataaggaaaatatctggtgggaagacact
caaaatccactgttccaagaggccgtgacaacattcacccaccccatgcatgtgttggag
ccagatgcagattgtgctacatcaacctttgggaaaataaaacaaatgtga
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