Salvelinus namaycush (lake trout): 120058830
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Entry
120058830 CDS
T07522
Name
(RefSeq) homeobox protein Hox-C11a isoform X1
KO
K09296
homeobox protein HoxC/D11
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120058830
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120058830
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
HVO_2718
Motif
Other DBs
NCBI-GeneID:
120058830
NCBI-ProteinID:
XP_038863490
UniProt:
A0A8U1ESM4
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Position
Sna14:10841427..10844397
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AA seq
310 aa
AA seq
DB search
MFNSVNLGNFCPQTRKDRTSEFGDRTGCASNIYLPNCTYYVPEFSAVSTFLPQASSRQIT
YPYSSNLPQVQPVREVSYGLDPSSKWHHRSNYASCYSGEDLVHRDCLPSSTMTEMLMKTN
ESVYSHHHHHHHHPSSNHSSTGFYPGVGKNNVLPQGFDRFFETAYCGADNQSAENCLHKS
EASKLETESQQPAALLGAPDQDKDPEDEEEHTHSGSCTSSATKDGSASKNSHSSTPRTRK
KRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDR
LQYFSGNPLL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtgaatctgggaaacttctgcccccagacgcgcaaagaccggacatcc
gagtttggggacagaacgggctgcgcctcaaacatctacctcccgaactgcacctactac
gtccccgaattttccgccgtctctacgtttcttccacaggcctcgtcgcggcagataacc
tacccatattcctcaaatctgcctcaagtgcagccggtacgggaagtttcctatggattg
gacccttctagtaaatggcaccatagaagcaattatgcatcatgctactctggagaggat
ctggtgcacagggactgtcttccgtcatccaccatgacagaaatgcttatgaaaacgaac
gagagtgtgtacagtcatcaccaccaccaccaccaccatcccagctccaaccattcctcc
acagggttctaccccggcgtggggaaaaacaacgtcctccctcaaggtttcgaccgcttt
tttgagaccgcatactgcggcgcggacaatcagtcagcagagaattgtttacataagagc
gaggctagtaaactggaaacagagtcccagcagccagcggctctactgggcgccccagac
caggacaaggacccagaggatgaggaggaacatacacattcgggctcgtgtacttcttca
gccacgaaggacggcagtgccagcaagaacagccactcgagtactcctcgcacgaggaag
aagagatgtccatactccaaatttcagattcgagaattggagcgggagttcttctttaac
gtttacatcaataaagagaaacggctgcagctttcccggatgctgaacctcaccgaccga
caggttaaaatctggtttcagaatcgaagaatgaaagaaaagaaattaagcagagatcgt
ttgcaatatttttctggaaaccctctattgtga
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