Salvelinus namaycush (lake trout): 120058838
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Entry
120058838 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-C1a-like
KO
K09301
homeobox protein HoxA/B/D1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120058838
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120058838
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Homez
Motif
Other DBs
NCBI-GeneID:
120058838
NCBI-ProteinID:
XP_038863501
UniProt:
A0A8U1BYV9
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Position
Sna14:10982985..10987115
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AA seq
327 aa
AA seq
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MNLYQELTCDGESSALFAGGHRPGEVRIGDLDQIISPELGAGNEGNSLSEGDPGYSLQHS
YPSFSGANSATDCTVTQLPVYSGSSSSPLTQSQGFSTTPPACLHYSRLPSYLRVQEHDFP
GLGYSSSTHITGTEALAHAEFGSINAHIKIYTHDGSNVHFAVVDSSSHSEPNCKVAELSH
RSKTFDWMNVKKRSQARTAKMHMACGLSIVAPGVSMDRGGGGNHSIPTDGHHITANGVLR
TNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLSETQVKIWFQNRRMKQKKLMREGLL
PVAPPVLKLLRKLTLQQPGHLFLSWTT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtatcaagagttaacgtgcgatggggagagtagcgctctgttcgcaggggga
caccgaccaggggaggtcaggataggtgacttggaccagatcatttctccagaacttgga
gctggcaatgagggtaactctttatcagagggtgacccgggatattcattacaacacagt
tacccgtctttctccggtgccaattctgcaaccgactgtacggtaactcagctcccagtc
tactcaggctcgagcagctctcctctgacacagagtcagggcttttcaaccacgccaccg
gcctgccttcactactctcgtctcccctcctacctccgggtgcaggaacatgacttcccc
ggacttggatactcctcttccacacacatcaccgggactgaggcgctggcgcacgcagaa
ttcgggtctataaatgcgcacattaaaatctacactcatgatgggtctaatgttcacttt
gctgttgtggacagtagctctcactccgagcccaattgtaaggtagctgaactaagtcac
aggagcaaaacttttgattggatgaacgtgaagaagagaagtcaagctcggacggccaag
atgcacatggcctgtggattaagtatagtcgctccgggcgtcagtatggacagaggaggt
ggaggtaaccacagcattcccaccgatgggcatcatattaccgctaacggggtactgagg
accaatttcaccaccaaacagctcacggagctcgagaaggagttccacttcaacaagtac
ctgacgcgagccagacgcgtggagatcgcgagcgccctgcaactgagcgaaacgcaggtg
aagatttggttccagaaccggcgaatgaaacagaagaaattaatgcgcgagggccttctc
ccggtggcccctcccgtcctcaagctgctcagaaagctcacgctccaacagcctggacac
ttattcctctcctggacaacttga
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