Salvelinus namaycush (lake trout): 120058855
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Entry
120058855 CDS
T07522
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120058855 (zgc:193690)
03015 mRNA surveillance pathway
120058855 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120058855 (zgc:193690)
Enzymes [BR:
snh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120058855 (zgc:193690)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120058855 (zgc:193690)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
PhaP_Bmeg
PP-binding
Motif
Other DBs
NCBI-GeneID:
120058855
NCBI-ProteinID:
XP_038863520
UniProt:
A0A8U1ESN0
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All DBs
Position
14:complement(13589956..13601587)
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AA seq
370 aa
AA seq
DB search
MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFALAMLSHVDPANKWTQCLCIA
PTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGTKIQEQIVIGTPGTVLDWCSKLK
IIDPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPNECQMLLFSATFEDSVWKFAERVV
PDPNIIKLKREEETLDTIKQYYVLCNDKDEKFTALCNIYGAITIAQAMIFCHTRRTAGWL
SAELTKEGHVVALLSGEMTVEQRAAIIERFREGKEKVLVTTNVCSRGIDVEQVSVVINFD
LPMDKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKQSMNILNQIEEHFNKKINKLDTD
DLDEIEKISN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaacagaccctctaagatccaggagaatgccctgcccatgatgctggcagag
ccacctcagaacctgattgcccaatcacagtccggcacaggtaaaacagctgcctttgcg
ctggccatgctcagccatgttgacccagctaacaaatggactcagtgtctttgcattgcc
ccaacgtacgagctagccttgcagactggtaaagtcattgaacagatggggaaattctat
cctgaggtcaaattggcatatgccattcgtggcaataaattggaccgagggacgaagatt
caggagcaaattgtcatcgggacacctggcacggtcctagactggtgctccaaactgaag
atcatcgaccccaagaagatcagcgtcttcgtcctggacgaggctgacgtcatgattgcc
acacaaggtcaccaggaccagagcatccggatccaaagaatgttgccaaatgaatgtcag
atgctgctgttttcggccacgtttgaggactcagtctggaagtttgccgagagggttgtg
ccagaccccaacatcatcaagctgaaacgtgaagaggagactctggacaccatcaagcag
tattacgtgctctgcaatgataaggacgagaagttcacagccctctgtaatatctacgga
gccatcaccatcgcccaggctatgatcttctgtcatacccgaaggacagctggctggctg
tctgctgagctgaccaaagagggccatgtggtggcactgctgagtggggagatgactgtt
gagcagagagcggccatcattgaacgcttcagggagggcaaagagaaagtcctagtgacc
accaacgtatgctccagaggcattgatgttgagcaagtttccgtggtgatcaactttgac
ctgcccatggacaaagacggaaacgctgacaacgagacataccttcaccggattggccga
acaggacgtttcggcaagagggggcttgccgtcaatatgattgacagcaaacaaagcatg
aacattctcaaccaaatcgaggagcatttcaataagaagataaacaaacttgacactgac
gatctggatgaaatcgagaaaatcagcaactga
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