Salvelinus namaycush (lake trout): 120059045
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Entry
120059045 CDS
T07522
Symbol
rbm15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120059045 (rbm15)
03041 Spliceosome [BR:
snh03041
]
120059045 (rbm15)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120059045 (rbm15)
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120059045 (rbm15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120059045
NCBI-ProteinID:
XP_038863743
UniProt:
A0A8U1ER77
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Position
Sna14:complement(3828121..3831817)
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AA seq
869 aa
AA seq
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MKGKERSPIKKRSRALDDIRDRGGGHPPSKKMGAISVSSGSNNGNSSTKSDAGSTRRSLL
GEKRDRDFDGHVSSRSGVSNHSYPGAVASAIGKNHNLGLTLDLATARTSNSRGERALPPP
NNNESEYKTLKISELGTQLSDEDIEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPED
ARAAKHARGRLVLYDRPLKIDAVYINRRRSRSPVERVDRDPYVGAPGHRHLHTQRPLSPS
GLGYRDYRLQQLALGRLPPPPLPPLPRDLEREREFALFEARSRPGPAFIAERAAAFREED
FISPEDDQRANRTLFLGNLDITVTETDLRRAFDRFGVITEVDIKPTRGQTSTYGFLKFEN
LDMAHRAKLTMSGKIVGRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRT
IDYRKGDTWAYIQYESLDAAQAACTHMRGFPLGGPERRLRVDFADTEHHYQQQFLQPLPL
PPFDMVAEAFIHRATAEPLRDRERTPPLLHFRERDLGFPGAEWPPNPAMRERVRPGVFEL
PDHLQRDRRPGGREPWSLERELVGRGGDPGRKRRLMDDGRHLDVSPDSTDRTARRRRGGP
SPDGSPDGGRFSDSERPPRGDDRPSPGRDRRPSLERPSGGDRRLKNQGNLAERGASSSGL
ASSTGERKRKAGDSSSRGPGAKRDRSSDQGGSKGSQSSKLSLAWHGMLLLKNSNFPANMH
LLEGHQGVAKDLLVDGPTGRQVGELKITQRLRLDQPKLDEVSRRIKAAGPGGYAVLLAVP
GSGGEEVSSTDPAASTQRPLRNLVSYLKQKQAAGVISLPVGGSRDKDHQGVLHAFPPCEF
SQQFIDASAKALAKTDEDYLVMVVVRGPS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaagaaaggtcgccgattaaaaagcgctctcgggctttggatgatatccga
gacaggggaggaggccatccgcccagcaagaaaatgggggctatctcagtttccagtggg
agcaataatggaaatagctcgactaaaagtgacgcaggatctacaagaaggagtttgttg
ggcgaaaagagagacagggattttgacgggcatgtttccagtcgatccggcgtgagtaac
catagttatcccggtgctgttgctagcgctatcggtaagaaccacaacttgggcttgact
ctcgatttagccactgcaaggactagtaattctcgtggcgagcgtgctctgcctcccccc
aacaacaacgaaagtgagtacaaaactcttaaaatcagtgagttgggaacccagttgagc
gatgaagacatcgaagacggacttttccacgaattcaaaaaattcggggacgtgagtgtc
aaaataagccgcagcaacgacgagagaatcgcttttgtcaacttcagaaagcccgaggat
gccagagcagctaaacacgcccggggcaggttagtactttacgaccgtcctctgaaaatc
gacgcagtgtacatcaacagacggagaagtcgctctccagttgagagagttgacagagac
ccctatgttggagccccagggcacagacaccttcacacccagagacccctctccccatca
gggcttggatacagagactacagactacagcagctggcccttgggcgcctccctcctccc
ccacttccccctttgcccagagacctagaacgggagagggagtttgccctgtttgaagcc
aggtcgcgcccaggtccagctttcattgcagagagagctgctgctttccgcgaggaggat
tttatctctcccgaggatgaccaaagagctaacagaacgctgtttctgggcaacttggac
atcacagtcacagagacggacctgaggagggcgtttgacagatttggggtgataacagag
gtggatataaagcccacacggggacagaccagcacatacggatttctgaagtttgagaac
ctagacatggcccatcgcgccaaactcaccatgtctgggaagatagtgggccgtaacccc
ataaagattggctatggtaaggccacccccaccacacgcctatgggtgggcgggctcgga
ccctgggtccccctagcagcattggccagagagtttgaccgctttggtacaataaggacc
attgactacagaaagggggacacctgggcttatatacagtacgagagccttgacgctgct
caggctgcgtgcactcacatgcgtggcttccctctgggggggcccgagaggagactcagg
gtggactttgcagacacagagcaccactaccagcagcagttccttcagcctcttcctcta
ccccccttcgacatggtggcagaggctttcatccaccgagccacagctgagcccctgagg
gacagggaaaggactccaccgctgctccacttcagagagagagatctgggcttccccggg
gctgagtggccccctaacccggctatgcgtgaacgagtacgtcccggggtctttgagctg
ccagaccacctgcagcgggaccggcggccgggggggagggagccctggtctctggagcgt
gagctggtggggcgcggcggcgacccaggacggaaacgacgcctcatggacgacggtcgc
catcttgatgtctctcctgacagcactgaccgcacggcacgccggcgcagaggtggccca
tccccagacggtagccctgacggaggccgcttcagtgactcagagcgcccccctcgcggc
gacgacagaccctcccctggacgagaccgccgccccagtctggagcgtcctagcggaggg
gacaggagattgaagaaccaggggaatctcgccgagagaggggcctccagcagtggcctc
gcatcttcaacaggggagcggaaacgtaaagccggcgacagcagcagcagaggacccgga
gctaagagggatcgctcctcagaccagggcggctctaaaggcagtcagtcatctaagctt
agcctggcctggcacggcatgctcctcctgaagaacagcaacttccccgccaacatgcac
ctcctggagggtcaccagggcgtggccaaggacctcctcgtcgacggccccacggggaga
caggtgggggagctcaagatcacccagcgtctccgcctcgaccagcccaagctggacgag
gtctccagacgcatcaaagcggccggccccggcggctacgctgtcctcctggcggttccg
ggttccggtggcgaggaggtatcgtcgacggaccctgcagcttccacccagcgtcctctc
cgcaatctggtgtcctacctgaaacagaagcaggcagccggagtcatcagcctgccggtt
ggaggcagccgggataaggaccaccagggtgttctccacgcgttccctccctgtgagttc
tcacagcagttcattgatgcctcggctaaagctctggccaaaacggacgaggactatctg
gtgatggtcgtggtgcgagggccatcataa
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