Salvelinus namaycush (lake trout): 120059123
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Entry
120059123 CDS
T07522
Name
(RefSeq) retinoic acid receptor gamma-A-like
KO
K08529
retinoic acid receptor gamma
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120059123
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120059123
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120059123
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120059123
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120059123
NCBI-ProteinID:
XP_038863864
UniProt:
A0A8U1C7L4
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Position
Sna14:10661558..10712943
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AA seq
506 aa
AA seq
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MFDCMEALGMGPRQLYDVTSRGACMLRKASPFFAGLDPFAWTGSASVQSVETQSTSSEEM
VPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEELVLPESYELSGELEELVNK
VSKAHQDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTESSGES
SPPPAPPPVPPASSKPPATMKTEAEDEEDSWGTENGSEPSPEEEDEDDYDDGEEEDRDRG
SDSEGESWALEGSSEGARKNHAGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggaagctctggggatgggcccacgccagctatatgatgtcaccagc
cggggtgcgtgcatgctgcggaaggcgagccccttcttcgcagggctggaccccttcgct
tggaccggcagcgccagcgttcaatcggtggagacccagagcaccagctctgaggagatg
gtccccagctctccctctccacctcccccaccacgcatctacaaaccctgcttcgtgtgc
caggacaagtcctctggataccattacggagtcagttcctgtgagggctgcaagggtttc
ttccgacgcagtatccagaagaacatggtgtacacctgtcaccgagacaagaactgccag
atcaacaaggtcaccaggaaccgctgccagtactgccgactgcagaagtgctttgaggtc
ggcatgtccaaggaagcggtgcgtaacgacaggaacaagaagaagaaagatgtgaaggag
gagttggtgttgccagagagttatgagttgagtggagaactggaggagctggtcaacaaa
gtcagcaaagcccaccaagacaccttcccctcactgctgcagctgggcaaataccacacc
aactccagtgcagagcagcgcgtgcagctggacctggggctgtgggataagttcagtgag
ctttccaccaagtgcatcatcaagatcgtggagtttgccaagcgcctccccggcttcacc
accctcaccatcgctgaccagatcaccctcctcaaatcagcctgcctggatatcctgatg
ttgaggatctgcacccgctacactccagagcaggacaccatgaccttctcagacgggctg
accctgaaccggacccagatgcacaacgcaggcttcggcccgctcacagacctggtgttt
gcctttgctggccagctgctgcctctggagatggacgacacagagacgggcctcctcagc
gccatctccctcatctctggagaccgtatggacctggaagagccccagaaggtggacaag
ctgcaagagcccctcctggaggccctgaagatctacgcacgtcgcaggcgccccaacaaa
ccacacatgttcccccgcatgctgatgaagatcactgacctcagaggcatcagcactaag
ggggcagagagagccatcactctgaagatggagatcccaggccccatgcctcctctgatc
agggagatgttagagaacccagaggccttcgaggaccaaacagagagcagtggagagagc
tccccaccgcctgcccctccacccgttccaccagcctcctccaagccccccgccaccatg
aagactgaggctgaggacgaggaggacagctgggggacagagaatggcagcgagccttcc
ccagaggaagaagatgaggatgactatgatgatggggaggaggaggaccgggacaggggc
tcggacagcgagggggaatcctgggctctggagggtagcagcgaaggggctaggaagaac
catgccgggagggcgcagtga
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