Salvelinus namaycush (lake trout): 120059140
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Entry
120059140 CDS
T07522
Name
(RefSeq) cyclin-T1-like isoform X1
KO
K15188
cyclin T
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120059140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120059140
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
120059140
Brd4/P-TEFb complex
120059140
7SK RNP complex
120059140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
120059140
NCBI-ProteinID:
XP_038863902
UniProt:
A0A8U1C0M0
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Position
Sna14:complement(11432050..11443204)
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AA seq
697 aa
AA seq
DB search
MAASFPSPSGINNKWYFTREQIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETM
LASLSNPSSSSSSSYMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAA
QKRKLENMEASVKREYASAAQALIGQHQRKEKYHRDQQQSSSHHSSSASSDLSSPSPIIL
KIPLEKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEE
GGKSREGKHRERSHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSD
SSRMSSSSSASRKRTHSTESQGSHPSKVSKSSRNSAHQLPALLAASSAHSLGAQTAEILP
SLGLPSLHQGNFSHSKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMF
DYRSQYGEYRYSGGSRGGSRPPPLPAEPPPPLPPLPK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgttcccttctccttctggaataaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgcggggcttgatccagacaaggaattatcctac
agacagcaagccgcgaaccttctacaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtcatagctccagcaacactgttcctggctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgcctcaaccctcaggaccct
tcaccagacgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcatgtt
gtcaagtgcacccagctcgtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgcgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagatggcaagcactggtgggagtatgtggacaatactgtcacccttgagctgctg
gatgagctcactcacgacttcctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctctgagaccatg
ctggccagcctctccaacccttcctcttcatcttcttcctcatacatggctcccatacta
ctggagctcaagtcgaccctgggcagtggctccgaccagcccaaccacgtcgagctgcac
gccccagccaaggtgtcactgagtgagtaccgggccaagcacgctgatgtcctggctgct
cagaagaggaagctggagaacatggaggccagcgtgaagagggagtatgcctcggcagcc
caagctctgataggccaacatcagaggaaggagaagtaccaccgtgatcagcagcagtcc
agctcccaccattccagctcagcctcctctgacctcagcagcccctcgcccatcatcctc
aagatccccctggaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctg
gggactggggggggaggggggcacagtggaggagggaacagaggagccggaggagaacag
gacatcaaagtgagaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggag
gggggcaagagtagggagggcaagcatcgagaacgctcccaccaccaccatcaccaccac
caccatcattcatcgtcgtctttgagcggtgcttccgtctcttcgtcctcgtcacataaa
cactcagccagtgctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgac
tcatctagaatgagctcctcttcctctgcgtctcgaaagaggacacactccacggagtcc
cagggatcccacccctccaaagtctctaagtcctccaggaactcagcccaccagctacct
gctctgttagccgcctccagtgcacactccctgggggcgcaaactgctgagatcctccca
tccctgggtctcccctccctccaccagggaaacttctctcactccaagggggacaagact
gacactaacggacacaatgcaggcgggggaagccagtcaaatgagtaccaggacacattt
gagatgctgaactctttactgagtgctcagggggtccaacctgctcagcctcccatgttt
gactaccggtctcagtacggggagtacagatacagcggagggtccagggggggctctcga
ccaccacccctgcctgctgaaccgccacctccgctaccccctttaccaaaatga
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